Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1570 ATGGTAGCTGCAAATGAGAGGGTCGTCGCTGTGATCATGGTTGGAGGACCCACTAAAGGTACTAGATTCCGACCATTGTCATTCAACGTACCCAAGCCACTTTTTCCATTAGCAGGACAACCCATGGTTCATCATCCAATTTCTGCTTGTAAAAGGATTCCTAATTTGGCTCAGATTTATCTGCTTGGTTTCTACGAGGAACGCGAATTTGCCTTATATGTATCTTCTATCTCAAATGAGCTTAAAGTCCCTGTTAGATACTTGAAGGAAGACAGGCCACATGGTTCAGCTGGTGGTCTTTATCATTTTAGAGATCTGATCATGGAAGAGGATCCGTCACATATCTTCTTGCTGAACTGTGATGTATGCTGCAGTTTTCCACTGCCAGAAATGCTGGATGCTCATAAAAGATATGGTGGGATGGGAACAATACTAGTTGTCAAGGTTTCTGCAGAGTCAGCAAGTGAGTTCGGGGAATTAGTAGCTGATCCAACCACTAATGAACTATTGCATTACACAGAGAAACCCGAAACTTTTGTAAGTGATCGTATAAACTGTGGTGTGTACGTATTTACACCTGATATCTTTACAGCCATTGAGGGTGTTTCTACTCAGCGGAAAGACAGAGCTAACCTAAGACGTGTCTCAAGCTTTGAAGCAATGCAGCCAGACACAAGGAGTCTTCCAGTCAATTATGTCAGATTGGATCAAGATATCCTCTCACCTCTTGCGGGGAAGAAGCAATTGTACATTTATGAAACCAATGACTTTTGGGAACAAATCAAAACTCCAGGAATGTCCATAAAATGTTCTGGCTTGTATCTTGCCCAATTTCGTTACACATCCCCCCATTTATTAGCAAATGGAGATGGTATTAAAAAAGCCAGCATCACCGGTGATGTTTACATTCACCCATCAGCAAAAGTGCATCCATCTGCTAAGATTGGTCCAAGTGTATCAATATCTGCAAATGCTCGTATAGGAGCTGGTACAAGGCTCAAACATTGTATCATCCTTGATGACGTTGAAATCAAGGAAAATGCTCTTGTTGGTCATGCAATTGTTGGATGGAAATCATCTATTGGTCGATGGGCATGTGTTGAGGCTAGTGGAGATTACAATGCAAAGCTCGGGGTAACAATACTTGGTGAATCTGTGACCGTTGAGGATGAGGTAGTGGTTTTGAATAGCATTGTTCTGCCACATAAGACCCTAAATTTGGGTGTTCAAGATGAGATTCTTTTATAG 1248 0.4183 MVAANERVVAVIMVGGPTKGTRFRPLSFNVPKPLFPLAGQPMVHHPISACKRIPNLAQIYLLGFYEEREFALYVSSISNELKVPVRYLKEDRPHGSAGGLYHFRDLIMEEDPSHIFLLNCDVCCSFPLPEMLDAHKRYGGMGTILVVKVSAESASEFGELVADPTTNELLHYTEKPETFVSDRINCGVYVFTPDIFTAIEGVSTQRKDRANLRRVSSFEAMQPDTRSLPVNYVRLDQDILSPLAGKKQLYIYETNDFWEQIKTPGMSIKCSGLYLAQFRYTSPHLLANGDGIKKASITGDVYIHPSAKVHPSAKIGPSVSISANARIGAGTRLKHCIILDDVEIKENALVGHAIVGWKSSIGRWACVEASGDYNAKLGVTILGESVTVEDEVVVLNSIVLPHKTLNLGVQDEILL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1570 415 Pfam Nucleotidyl transferase 10 211 IPR005835 GO:0009058|GO:0016779
Gso6g1570 415 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 276 IPR029044 -
Gso6g1570 415 Gene3D Hexapeptide repeat proteins 287 410 - -
Gso6g1570 415 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 3 415 - -
Gso6g1570 415 CDD M1P_guanylylT_A_like_N 10 274 - -
Gso6g1570 415 PANTHER ADP-GLUCOSE PYROPHOSPHORYLASE FAMILY PROTEIN 3 415 - -
Gso6g1570 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 357 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1570 Gso-Chr6 16265096 16270873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1570 K00966 - gmx:100817201 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1570 6 16265096 16270873 Gso6g1570 6 16265096 16270873 ECH
Gso4g1497 4 43734511 43740233 Gso6g1570 6 16265096 16270873 GST