Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1568 ATGAAGCTTCCATTTCCCGCCATTTTTCTCATCTTCATCTTCTTCCTCCCTTCCTCCACCACCGGCGCGGGCATCGACACCATTTTCCGCCTTATTCGGATCCAAGACCGCGAGAGGGCTCCCCCTTCGGTCCAAGAAGCCGCCGCGCGCGGCGTTCTTCTCCGCCTGCTGCCATCTCACTCCTCCAGCTTCGAATTCCGGATACTCTCCAAGAAGCAATGCGGTGGTGAATATTGCTTCAAGATAAAAAACCATCCTTCTTTCACAACAGCAGGGGATCCTCAAATCCTCAGGATTGAAGGCACAACTGGAGTGGACATTGTGGCCGGTCTGCACTGGTACCTCAAGCACTGGTGCGGTTCCCACATTTCATGGGACAAAACCGGTGGCTCCCAGCTATTTTCCGTACCCAATGTGGGACTTCTTCTCCCGCGCGTTCACCACGCAGGGGTCTCTGTTCAGAGGCCTGTTCCGTGGAGCTATTACCAAAACGCCGTTACATCTAGCTATTCTTTCGCTTGGTGGGACTGGGAAAGATGGGAAAGAGAAATTGACTGGATGGTCCTGCATGGTGTCAACTTGCCGCTTGCGTTTACTGGACAAGAGGCTATCTGGCAGAAAGTGTTCCAGGAGAAATTTAACATGACCACTTCTGATTTGGATGATTTCTTTGGAGGTCCCGCATTCCTTGCTTGGTCCCGCATGGGGAATTTACATGGATGGGGTGGACCACTGCCACAGAGCTGGTTTGATCAACAATTAATCTTACAGAAGAAAATTCTAGCCAGAATGTTTGAGCTTGGAATGACACCAGTCCTGCCAGCCTTTTCTGGTAATGTCCCTGCTGCACTGAAACGTATATTTCCATCAGCAAAAATAACACGGTTGGGAAATTGGTTTTCTGTCAAGAATGACCTCAAATGGTGCTGCACCTATCTTCTTGATGCAACTGATTCTTTGTTCATTGAGATCGGGAAAGCATTCATTGAGAAGCAACTGCAAGAGTATGGAAGAACCAGCCACATATACAACTGTGATACTTTTGATGAGAACACCCCACCAGTTGATGATCCAGAGTACATTTCATCATTAGGTGCAGCAACTTTTAAAGGAATGCAGAGTGGTGATGATGATGCTGTTTGGCTGATGCAGGGATGGCTATTTTCATATGATCCATTCTGGAGACCTCCTCAAATGAAGGCCCTTTTACATTCTGTTCCTGTTGGAAAGCTGGTGGTACTTGACCTATTTGCTGAAGTAAAACCCATTTGGGTAACCTCAGAACAGTTTTATGGAGTTCCCTACATCTGGTGTATGCTGCACAATTTTGCAGGAAACATTGAGATGTATGGGATATTAGACGCAATAGCATCTGGGCCAATTGATGCACGCACAAGTAATAACTCAACAATGGTTGGAGTTGGAATGTCTATGGAAGGTATAGAACAGAATCCCATTGTCTATGATTTGATGTCAGAAATGGCATTTCAGCACAAGAAAGTTGATGTTAAGGCATGGGTTGATATGTATTCAACTAGACGATATGGACAGACACTTCCTTTAATACAAGAGGGATGGAACGTCTTATATCACACCATTTACAATTGCACTGATGGAGCATATGACAAAAACAGAGATGTCATCGTAGCATTCCCAGATGTTGACCCTTCCTTAATTTCAGTACAGCATGAGCAGTCTCACCACAATGACAAGCCCTACTCAGGAACAATTATCAAGGAAATAACTGATTCATTTGATCAACCGCATTTATGGTATCCAACTTCTGAAGTAATTTATGCATTGGAACTATTTATAACTAGTGGAGATGAACTTTCTAGATGCAATACTTATAGGTATGACCTAGTTGATCTGACTAGACAAGTCTTGGCAAAATATGCTAATGAATTGTTCTTTAAGGTCATAGAGGCATATCAATCACGTGATATCCATGGAATGACCCTCCTCAGCCAGAGATTTCTGGACCTAGTGGAAGATTTGGACACACTATTGGCTTGCCATGATGGGTTTCTTCTGGGACCTTGGTTAGAAAGCGCAAAGCAACTAGCTCTAAATGAAGAACAGGAGAGACAGTTTGAGTGGAATGCTAGAACACAAATCACCATGTGGTTTGACAACTCAGATGAGGAAGCCAGTCTGCTTCGTGACTATGGAAACAAGTACTGGAACGGGCTTCTACATGATTACTATGGTCCCAGAGCTGCTATTTATTTCAAATATTTAAGAGAAAGCTTAGAGAGTGGTGAAGATTTCAAGCTAAGGGGATGGAGGAGGGAGTGGATTAAGCTTACTAATGAATGGCAAAAGCGTAGGAATATTTTCCCAGTGGAAAGTAGTGGAGATGCTCTAAACACTTCAAGGTGGCTCTTTAACAAATACCTGAACCTGAGCAATCCTGAAACAAAGCTTGTACTGGAGTTGAACTGA 2445 0.4429 MKLPFPAIFLIFIFFLPSSTTGAGIDTIFRLIRIQDRERAPPSVQEAAARGVLLRLLPSHSSSFEFRILSKKQCGGEYCFKIKNHPSFTTAGDPQILRIEGTTGVDIVAGLHWYLKHWCGSHISWDKTGGSQLFSVPNVGLLLPRVHHAGVSVQRPVPWSYYQNAVTSSYSFAWWDWERWEREIDWMVLHGVNLPLAFTGQEAIWQKVFQEKFNMTTSDLDDFFGGPAFLAWSRMGNLHGWGGPLPQSWFDQQLILQKKILARMFELGMTPVLPAFSGNVPAALKRIFPSAKITRLGNWFSVKNDLKWCCTYLLDATDSLFIEIGKAFIEKQLQEYGRTSHIYNCDTFDENTPPVDDPEYISSLGAATFKGMQSGDDDAVWLMQGWLFSYDPFWRPPQMKALLHSVPVGKLVVLDLFAEVKPIWVTSEQFYGVPYIWCMLHNFAGNIEMYGILDAIASGPIDARTSNNSTMVGVGMSMEGIEQNPIVYDLMSEMAFQHKKVDVKAWVDMYSTRRYGQTLPLIQEGWNVLYHTIYNCTDGAYDKNRDVIVAFPDVDPSLISVQHEQSHHNDKPYSGTIIKEITDSFDQPHLWYPTSEVIYALELFITSGDELSRCNTYRYDLVDLTRQVLAKYANELFFKVIEAYQSRDIHGMTLLSQRFLDLVEDLDTLLACHDGFLLGPWLESAKQLALNEEQERQFEWNARTQITMWFDNSDEEASLLRDYGNKYWNGLLHDYYGPRAAIYFKYLRESLESGEDFKLRGWRREWIKLTNEWQKRRNIFPVESSGDALNTSRWLFNKYLNLSNPETKLVLELN* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1568 814 Gene3D - 25 148 IPR029018 -
Gso6g1568 814 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 36 801 IPR007781 -
Gso6g1568 814 Pfam Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 47 139 IPR024240 -
Gso6g1568 814 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 161 497 IPR024733 -
Gso6g1568 814 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 36 801 - -
Gso6g1568 814 Coils Coil 814 814 - -
Gso6g1568 814 Gene3D - 500 809 - -
Gso6g1568 814 Pfam Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 506 798 IPR024732 -
Gso6g1568 814 Gene3D Glycosidases 156 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1568 Gso-Chr6 16221786 16245084 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1568 K01205 - gmx:100791160 1662.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1568 6 16221786 16245084 Gso6g1568 6 16221786 16245084 ECH