Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1540 ATGAGCATTCACTACTTCTTCTGCTTCTTCTTGTCGCTCTCATCTTTCCATGTTTCTCTAGCAATTAAGGGAAGAATATTGCCTCAGCCTCAAACAACACATGAACTCATAAACCCATTCAGCCCCAAAGCCTCACTCATTCGTTATTGGAACACTCGCGTTTCGAATAACAATCAAATCCCTCATTTTCTTCTCTCAAAAGCTTCACCTCTCACTCCACAAAACTACGCCGTTCTCAACAAACTCCTAACCAACCAAAAACCTAGACCTAATGAAAACCTTCACCACTCTCTCTGCTCCTCACCGAACTTACTCTGTTCCTTCGACGACACACCAAACGCTCAAACACGTAAAAATGACGACGCTAACTTTGCCCTTTACAACAACAAACGCTTCGCCAACTACGGATCGTCCCGAGTCGGCGGAGTCGACTCGTTCAAGAACTACTCCAACGGCCTAAACGCCAACAACGACGCGTTCCGGCGGTACAGCGCCGCCTCGACGCGCCGCGGCGAACAGTTCAATAACTACGCCGACAACGGCAACGTCGCCAACACGAACTTCTCAAGCTACGGCTCCGCCGCGAATCAAACCTCCGGCGAGTTCAGCAACTACGACAAAACGGTGAACGTTCCGAATCTCGGATTCACCACCTACGACTCCGGCGCAAGCAATCACAAACTCTCGTTCTCGAGCTACGGAAATGAGACTAACTCTGGATCGCAAAGTTTCACAAGCTACGGTAAACGCGTTCGCGGCGGAACGAGCGAGTTCGCGAGCTACGCCGACGACGCGAACATTCTTCAGTCGGAGTTCAACAGCTACGGCGACCTGAGCACCGGAGCGAGCAACGACTCCTTCAAGTTCTACAGCTTCAACGGCAACAATCCGCGGCACGTTTTCAAAAGCTACGCCGCCGGATCGGCTTCCGGAGTTGACAATTTCATCAGTTACCGGAACCGCGCCAACGTCGGCGACGACTCGTTCCAGAGCTACGCCGCGAGGTCGAAGTCCGGCGCCGCCACGTTCGCGAACTACGGCATGTCGTTTAACGTCGGAAACGACAGTTTCACTGAGTACGGAAAGGGAGCAACGGGGAAAACCTCTTTCGGTTTTAAATCATACGGGTTAGGCCGTGGGTTTAAAGTTTACAACAAAGACGGCGCGTCGTTTTCTGAGTATCGAAATTTCAGCGCAGCCAGTGGCAAAGTTGTAAATAAGAGGGTGGAGCCGGGTAAGTTTTTTAGAGAATCTACGGTAAGAGAAGGAAACGTGATTCCAATGCCTGATATTAAAGATAAAATGCCTGCAAGGTCGTTTTTACCCCTCGCGATCGCGTCGAAATTACCGTTCTCGTCGTCGAGAATCGACGAAATGAGGGAAATATTCCACGCGCGGGAGGGGTCTTCCACAGAGCGCGTGATGGTGAACGCGTTAAAAGAGTGCGAGAGGGCACCAAGCAAAGACGAGACGAAACGGTGCGTATCGTCCGCGGAAGAAATGATAGGGTTCGCGGTTTCGGTTTTGGGTCCCAATGTGGCGGTTCGGAGCACCGAGAACGTGAACGGGTCAGGGTCGAGTGTGATGATTGGGAAGGTCTACGCAATCGACGGTGGAAAAGTGACCAAGTCAGTGTCGTGTCATCAGAGTTTGTACCCTTACTTACTGTACTATTGCCACAGTGTACCCAAAGTGAGAGTATACGAAGCTGAAATTCTTGACGTGGACACCAAGGAGATGATCAATCATGGGGTTGCCATCTGTCACCTTGACACGTCAGCTTGGGGCCCGCAACATGGGGCCTTCTTGGCTTTGGGGTTTGGCCCTGGGAAAATTGAAGTGTGCCATTGGATTTTCGAGAACGACATGACTTGGACCACTGCCAATTGA 1890 0.5116 MSIHYFFCFFLSLSSFHVSLAIKGRILPQPQTTHELINPFSPKASLIRYWNTRVSNNNQIPHFLLSKASPLTPQNYAVLNKLLTNQKPRPNENLHHSLCSSPNLLCSFDDTPNAQTRKNDDANFALYNNKRFANYGSSRVGGVDSFKNYSNGLNANNDAFRRYSAASTRRGEQFNNYADNGNVANTNFSSYGSAANQTSGEFSNYDKTVNVPNLGFTTYDSGASNHKLSFSSYGNETNSGSQSFTSYGKRVRGGTSEFASYADDANILQSEFNSYGDLSTGASNDSFKFYSFNGNNPRHVFKSYAAGSASGVDNFISYRNRANVGDDSFQSYAARSKSGAATFANYGMSFNVGNDSFTEYGKGATGKTSFGFKSYGLGRGFKVYNKDGASFSEYRNFSAASGKVVNKRVEPGKFFRESTVREGNVIPMPDIKDKMPARSFLPLAIASKLPFSSSRIDEMREIFHAREGSSTERVMVNALKECERAPSKDETKRCVSSAEEMIGFAVSVLGPNVAVRSTENVNGSGSSVMIGKVYAIDGGKVTKSVSCHQSLYPYLLYYCHSVPKVRVYEAEILDVDTKEMINHGVAICHLDTSAWGPQHGAFLALGFGPGKIEVCHWIFENDMTWTTAN* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1540 629 ProSiteProfiles BURP domain profile. 414 628 IPR004873 -
Gso6g1540 629 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 5 629 - -
Gso6g1540 629 SMART BURP_2 412 628 IPR004873 -
Gso6g1540 629 PANTHER POLYGALACTURONASE-1 NON-CATALYTIC SUBUNIT BETA 5 629 - -
Gso6g1540 629 Pfam BURP domain 414 626 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1540 Gso-Chr6 15841927 15844446 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1540 - - gmx:100784264 1263.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1540 6 15841927 15844446 Gso6g1540 6 15841927 15844446 ECH