Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1534 ATGGCAAAGTCATCTGAGCTGGCCATTGAAGAGCTGAAGAAGCTTCTCAGAGACAAGGAGGAATTTGATGCCGTGGCGGCTGCAAAAGTTGAGGAGCTTATAGCTGAGTTGCAGGGATGTGGCCCGCGTCCATATGAGCCTGCTGTGCAAAGAATCGTAGACGGATTTACTCACTTCAAGATCAACAATTTCGACAAGAACTCGGATCTGTACAGCCAACTTGCTAATGGCCAAAGCCCCAAGTATCTGGTGTTTTCTTGTTCTGACTCTCGAGTGAGTGCCACTACTATCCTCAACTTCCAACCTGGAGAAGCTTTCATGGTACGCAACATTGCTAACATGGTCCCTCCATTTAATCAGCTAAGGTACAGTGGAGTTGGTGCAGCCATTGAGTATGCTATCACGGCTCTTAAGGTGCCAAACATCCTGGTCATTGGACATAGTCGCTGTGGTGGAATCCAAAGGCTTATGAGTCATCCAGAGGATGGTTCTTCTCCCTTTGACTTCATAGATGATTGGGTGAAAATTGGTTTGCCTGCCAAACTCAAGGTCCTGAAAGAATACGAAGGCTATGATTTCAAAGAACAATGCAAATTCTGTGAAAAGGAGTCAGTGAATAACTCACTAGTGAACCTGAAGACATATCCATATGTTGAAAAGGGAATAAGGAACAAGAACATAGCCCTGTTGGGGGGTTACTATGATTTTGTGATAGGAGAATTCAAGCTTTGGAAGTATGAGTCTCACATCACTGAACCCATTTCCATTCCTCTCTGTACCCATTAG 786 0.4478 MAKSSELAIEELKKLLRDKEEFDAVAAAKVEELIAELQGCGPRPYEPAVQRIVDGFTHFKINNFDKNSDLYSQLANGQSPKYLVFSCSDSRVSATTILNFQPGEAFMVRNIANMVPPFNQLRYSGVGAAIEYAITALKVPNILVIGHSRCGGIQRLMSHPEDGSSPFDFIDDWVKIGLPAKLKVLKEYEGYDFKEQCKFCEKESVNNSLVNLKTYPYVEKGIRNKNIALLGGYYDFVIGEFKLWKYESHITEPISIPLCTH* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1534 261 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 87 94 IPR015892 GO:0004089|GO:0008270|GO:0015976
Gso6g1534 261 PANTHER CARBONIC ANHYDRASE 3 256 - -
Gso6g1534 261 CDD beta_CA_cladeB 55 244 IPR045066 GO:0004089|GO:0008270
Gso6g1534 261 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 131 151 IPR015892 GO:0004089|GO:0008270|GO:0015976
Gso6g1534 261 Gene3D Carbonic anhydrase 43 256 IPR036874 GO:0004089|GO:0008270
Gso6g1534 261 Pfam Carbonic anhydrase 82 240 IPR001765 GO:0004089|GO:0008270
Gso6g1534 261 PANTHER CARBONIC ANHYDRASE 3 256 IPR001765 GO:0004089|GO:0008270
Gso6g1534 261 SMART Pro_CA_2 75 245 IPR001765 GO:0004089|GO:0008270
Gso6g1534 261 SUPERFAMILY beta-carbonic anhydrase, cab 34 254 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1534 Gso-Chr6 15740635 15744907 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1534 K01673 - gmx:547671 527.709