Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1511 ATGTCACCACACCCTACCCAGCAAAACCAAACCATAGCAAACCTAAGCACCAAACCTCTTTCTTTCAAGATCCTTGAATTCAGTCCCATGGCTCCAAGCATAAGCAAAACTGTGGAACTAAATTCATTTGGTCTTGTCAACGGTAATTTGCCTTTGTCCATAACCCTAGAAGGATCAAATTTCCTCGCCAACGGCCACCCTTTTCTCACGGAAGTTCCCGAAAACATAATAGTCACCCCTTCACCCATCGACGCCAAGAGTAGTAAGAACAACGAGGACGACGACGTCGTAGGTTGCTTCGTGGGCTTCCACGCGGACGAGCCCAGAAGCCGACACGTGGCTTCCCTGGGGAAGCTCAGAGGAATAAAATTCATGAGCATATTCCGGTTTAAGGTGTGGTGGACCACTCACTGGGTCGGTAGCAACGGACACGAACTGGAGCACGAGACACAGATGATGCTTCTCGACAAAAACGACCAACTCGGACGCCCCTTTGTGTTGATTCTCCCGATCCTCCAAGCCTCGTTCCGAGCCTCCCTGCAACCCGGTTTGGATGATTACGTGGACGTTTGCATGGAGAGCGGCTCGACACGTGTCTGTGGCTCCAGCTTCGGGAGCTGCTTATACGTCCACGTTGGCCATGACCCGTATCAGTTGCTTAGAGAAGCAACTAAAGTCGTTAGGATGCATTTGGGGACTTTCAAGCTTCTCGAGGAGAAAACCGCGCCAGTGATCATAGACAAGTTTGGTTGGTGTACATGGGACGCGTTTTACTTGAAGGTGCATCCCTCAGGTGTGTGGGAAGGGGTGAAAGGGTTGGTGGAGGGAGGGTGCCCTCCAGGGATGGTCCTAATCGACGACGGGTGGCAAGCCATTTGTCACGACGAGGACCCCATAACGGACCAAGAGGGTATGAAGCGAACCTCTGCAGGGGAGCAAATGCCATGCAGGCTGGTGAAGTTGGAGGAAAATTACAAGTTCAGACAGTATTGTAGTGGAAAGGATTCTGAGAAGGGTATGGGGGCCTTTGTTAGGGACTTGAAGGAACAGTTTAGGAGTGTGGAGCAGGTGTATGTGTGGCACGCGCTTTGTGGGTATTGGGGTGGGGTCAGACCCAAGGTTCCGGGCATGCCCCAGGCTAAGGTTGTCACTCCGAAGCTGTCCAATGGACTAAAATTGACAATGAAGGATTTAGCGGTGGATAAGATCGTCAGTAACGGAGTTGGACTGGTGCCACCACACCTGGCTCACCTTTTGTACGAGGGGCTCCACTCCCGTTTGGAATCTGCGGGTATTGACGGTGTTAAGGTTGACGTTATACACTTGCTCGAGATGCTATCCGAGGAATACGGTGGCCGTGTTGAGCTAGCCAAAGCTTATTACAAAGCGCTCACTGCTTCGGTGAAGAAGCATTTCAAAGGCAATGGGGTCATTGCGAGCATGGAGCATTGTAATGACTTCTTTCTCCTTGGTACCGAAGCCATAGCCCTTGGGCGCGTAGGAGATGATTTTTGGTGCACTGATCCCTCTGGAGATCCAAATGGCACGTATTGGCTCCAAGGGTGTCACATGGTGCACTGTGCCTACAACAGCTTGTGGATGGGGAATTTTATTCAGCCGGATTGGGACATGTTCCAGTCCACTCACCCTTGTGCCGAATTCCATGCAGCCTCTAGGGCCATCTCTGGTGGACCAATTTACGTTAGTGATTGTGTTGGAAAGCACAACTTCAAGTTGCTCAAGAGCCTCGCTTTGCCTGATGGGACGATTTTGCGTTGTCAACACTATGCACTCCCCACACGAGACTGTTTGTTTGAAGACCCCTTACATGATGGGAAGACAATGCTCAAAATTTGGAATCTCAACAAATATACAGGTGTTTTGGGTCTATTTAATTGCCAAGGAGGTGGGTGGTGTCCCGTAACTAGGAGAAACAAGAGTGCCTCTGAATTTTCACAAACTGTGACATGCTTAGCGAGTCCTCAAGACATTGAATGGATCAATGGGAAAAGCCCAATATGCATAAAAGGGATGAATGTGTTTGCTGTATATTTGTTCAAGGACCACAAACTAAAGCTCATGAAGGCATCAGAGAAATTGGAAGTTTCACTTGAGCCATTTAATTTTGAGCTATTGACAGTGTCTCCAGTGATTGTGCTGTCAAAAAAGTTAATTCAATTTGCTCCAATTGGATTAGTGAACATGCTTAACACTGGTGGTGCCATTCAGTCCATGGAGTTTGACAACCACATAGATGTGGTCAAAATTGGGGTTAGGGGTTGTGGGGAGATGAAGGTGTTTGCATCAGAGAAACCAGTTAGTTGCAAACTAGATGGGGTAGTTGTAAAATTTGATTATGAGGATAAAATGCTGAGAGTGCAAGTTCCCTGGCCTAGTGCTTCAAAATTGTCAATGGTTGAGTTTTTATTTTGA 2433 0.4838 MSPHPTQQNQTIANLSTKPLSFKILEFSPMAPSISKTVELNSFGLVNGNLPLSITLEGSNFLANGHPFLTEVPENIIVTPSPIDAKSSKNNEDDDVVGCFVGFHADEPRSRHVASLGKLRGIKFMSIFRFKVWWTTHWVGSNGHELEHETQMMLLDKNDQLGRPFVLILPILQASFRASLQPGLDDYVDVCMESGSTRVCGSSFGSCLYVHVGHDPYQLLREATKVVRMHLGTFKLLEEKTAPVIIDKFGWCTWDAFYLKVHPSGVWEGVKGLVEGGCPPGMVLIDDGWQAICHDEDPITDQEGMKRTSAGEQMPCRLVKLEENYKFRQYCSGKDSEKGMGAFVRDLKEQFRSVEQVYVWHALCGYWGGVRPKVPGMPQAKVVTPKLSNGLKLTMKDLAVDKIVSNGVGLVPPHLAHLLYEGLHSRLESAGIDGVKVDVIHLLEMLSEEYGGRVELAKAYYKALTASVKKHFKGNGVIASMEHCNDFFLLGTEAIALGRVGDDFWCTDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIQPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGKHNFKLLKSLALPDGTILRCQHYALPTRDCLFEDPLHDGKTMLKIWNLNKYTGVLGLFNCQGGGWCPVTRRNKSASEFSQTVTCLASPQDIEWINGKSPICIKGMNVFAVYLFKDHKLKLMKASEKLEVSLEPFNFELLTVSPVIVLSKKLIQFAPIGLVNMLNTGGAIQSMEFDNHIDVVKIGVRGCGEMKVFASEKPVSCKLDGVVVKFDYEDKMLRVQVPWPSASKLSMVEFLF* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1511 810 PANTHER - 30 810 IPR008811 -
Gso6g1511 810 SUPERFAMILY (Trans)glycosidases 244 594 IPR017853 -
Gso6g1511 810 Pfam Raffinose synthase or seed imbibition protein Sip1 57 792 IPR008811 -
Gso6g1511 810 Gene3D Aldolase class I 247 584 IPR013785 -
Gso6g1511 810 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 5-RELATED 30 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1511 Gso-Chr6 15295067 15301415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1511 56 810 Glycoside Hydrolase AT5G40390 65.359 0.0 1049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1511 K06617 - gmx:100800308 1678.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1511 6 15295067 15301415 Gso6g1511 6 15295067 15301415 ECH