Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1482 ATGATCACTATCCTATTTTTCTTGGTTTGTTTTGAATTCAGCAATGGTGTGAATGTGAGATCCTCTGAAGGGAGGAAAGGGCAGTGGCAACTGCTCCTCAACAACACTGGTGTGGTTGGCATGCATGTGGCTTTAACCTACAAAGACACAGTCATAATGTTTGATCAAACTGGAGCTGGCCAATCCGGTTACCGACTTCGCCGACGCTTCAACGGAAGTCGGTGCACAATAAACCACCATGATTTGTTGGACTCAACATGTTATGCTCATTCTGTGGAGTATGACATCAGTGCCAACAAAGTGAGACCTCTGAGGCTTGACACCGATCCTTGGTGCTCCTCTGCCTCATTCCTAAGCAATGGTACACTTTTGCAAACAGGTGGATTTGAAAAAGGTGCCAAAAGGGTCAGATTCTATAGGCCTTGTGGGAATCACCAATGTGATTGGATTCAATCAAAGAAAACACTATCTGATGAGAGGTGGTATGCTTCAAGTCAGATACTACCAGAGCATAACAGGGTGGTGGTTGTTGGTGGAAGAAGAGTTTTCACATATGAATTTGTACCAAAAACTAGTCCTGGTGAAAAATCCTTTGACCTTCCATTCTTGCACCAAACCAATGACAGGGATGGAGGAGGGAACAACCTCTATCCCTTCCTCCACCTCTCATCTGACGGAAACTTGTTCGTTTTCGCCAACCGTGATTCGATCTTACTCAACCTGAGAAGGAACAGAGTGATCAAGACCTTCCCTCGGATTCCGGGGGAAGGGTCAAGAAACTACCCAAGCTCAGGTTCATCTGTGATGCTCCCATTAGACCACAGAGATAACTTCCAAAAAGTGGAAGTTATGGTGTGTGGAGGCTCATCCATTGGAGCACTTGAAGCTGCTAGAAAAGGCCGATTCTTAGAAGGTTTAAGATCATGTGGAAGAATGGTGATCACAGGGAACAACAACAAGTGGGAAATGGAGTACATGCCTAAGCCGCGTCTTCTTCATGACATGTTGATTCTCCCTACTGGTAACATTCTTATCATAAATGGGGCTAAACATGGTTGTGCAGGGTATGAAAATGCTAGAAACGCTTCACTTGAGCCTTACCTTTATAGCCCCAACAAAAAGCTAGGAAAAAGGTTCACAATGCTTAAATCCACTAAGATAGCTAGAATGTATCACTCATCGGCAACTCTTCTTTCTGATGGGAGGGTTTTGGTTGCGGGTGGTAACCCTCATGGGAGGTACATTTTTCACAATGTGGCATACCCAACTGAATTGAGACTTCAAGCATTTGTTCCACACTACATGGAAAGTAGGTACCATAATTGGAGGCCAAGTAACATGACGATATATGGCGGTGGTGGAAGCCATGCAATTGGGTATGGGAAAGAGTTTAGAGTTGAGTTCTTCCTTGAGAAGAGGATGCAAAACAATGAGGTGGGGTTCAGCGCCTATGCGCCGCCGTTCACCACGCATTCGTTCGCCATGAATCAGAGGATGCTGAAGCTGAGGTGCAAGAGCTTGGATAGAAAAGGTGGTGGGTGGGTTGTTGCAGTGTTGGAAGCACCACCATCGCCCAATGTTGCACCTTCTGGTTATTACTTGCTCACTGTTGTGAATGGTGGGATTCCAAGCATGTCTCAATGGGTTCAGTTTGCACACGCCTAG 1665 0.4565 MITILFFLVCFEFSNGVNVRSSEGRKGQWQLLLNNTGVVGMHVALTYKDTVIMFDQTGAGQSGYRLRRRFNGSRCTINHHDLLDSTCYAHSVEYDISANKVRPLRLDTDPWCSSASFLSNGTLLQTGGFEKGAKRVRFYRPCGNHQCDWIQSKKTLSDERWYASSQILPEHNRVVVVGGRRVFTYEFVPKTSPGEKSFDLPFLHQTNDRDGGGNNLYPFLHLSSDGNLFVFANRDSILLNLRRNRVIKTFPRIPGEGSRNYPSSGSSVMLPLDHRDNFQKVEVMVCGGSSIGALEAARKGRFLEGLRSCGRMVITGNNNKWEMEYMPKPRLLHDMLILPTGNILIINGAKHGCAGYENARNASLEPYLYSPNKKLGKRFTMLKSTKIARMYHSSATLLSDGRVLVAGGNPHGRYIFHNVAYPTELRLQAFVPHYMESRYHNWRPSNMTIYGGGGSHAIGYGKEFRVEFFLEKRMQNNEVGFSAYAPPFTTHSFAMNQRMLKLRCKSLDRKGGGWVVAVLEAPPSPNVAPSGYYLLTVVNGGIPSMSQWVQFAHA* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1482 554 CDD E_set_GO_C 458 550 IPR015202 -
Gso6g1482 554 Gene3D - 23 439 IPR037293 -
Gso6g1482 554 Pfam Glyoxal oxidase N-terminus 41 288 IPR009880 -
Gso6g1482 554 Gene3D Immunoglobulins 449 554 IPR013783 -
Gso6g1482 554 PANTHER ALDEHYDE OXIDASE GLOX-LIKE 13 553 - -
Gso6g1482 554 PANTHER SECRETED PROTEIN-RELATED 13 553 - -
Gso6g1482 554 SUPERFAMILY E set domains 439 550 IPR014756 -
Gso6g1482 554 Pfam Galactose oxidase-like, Early set domain 456 550 IPR015202 -
Gso6g1482 554 SUPERFAMILY Galactose oxidase, central domain 76 435 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1482 Gso-Chr6 14925157 14927074 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1482 - - gmx:100814200 1125.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1482 6 14925157 14927074 Gso6g1482 6 14925157 14927074 ECH