Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1471 ATGGCGGATGATAGTAACCGCCTCGTGAGGCTGCTATGCCGCCCGAAGCCACTCAACACCAAAGGATCCGACCCGGGAATCCATTTCTGGCTTATCGGATCCCCATTCTTCCCGCCACTCACCGTCGCCTCCTTCCTCCGCCGCATCCACGCCCTCCCCTCCGCTGCTTCCCCCGATTTGCCCAAGGAATCGGAGGACCTTCGCACTCTCATCCCGAGAGGCTTCGAAGTCGTCGGTGCCCTAGCTTCCGGCGATGACGCCCACGCTCGCGCGGCCGTTGACGCCGCGCGTACGTTGAGGAACCTTCTCTACGGCGAGGGAACGGATCGGCCGGTGATCGGAGCGGTTTGCGGCTTTGATTCCGGCGAGCTGCGGTTTTTTGTGTCAGAGAGTGAAAATGCGACGGGACTTGAATCCATTTCGTCGGTAATAGAGGAACGGGATTCGAAGAAGTTTGTGTGGGAGAATGGTTGCTTGCTTCACTGTGAGCTTCCAATTAAGTTGCCACTCTATTATAGTCTCAAGAATCCAACTGATGTTGAGAAATCATATGTACAGGCTACCGAAGCCGTTATTGCCAAGTTAAGAGACCCTCAGGCTGTGTACTTGTTAGAAACGTCAAACAAAGCCTCTCAGGATATATCTCCTCCTGTCATAATTCGAGGTCTACAATTAGACTTTAGCACAGACCTCTCCAAGATCAAGGCTTTGGCTGATGATGATGATGGCTTTGATGCAAGCTCACTATCATGTTCATACTTTCCCATCAGCAGTAAAGCAGGCTCACCAGTTTTTTCTGCAGAGAATGCAGATATTATCCAAGTTAGTGTTCTCTTTAATAGCTTAGGGTCATCATCAGCTTCTACTGTCCCTGTTGCCGAATACTTTCCAGTCCAGGAAGAAACTAGACTCCTTATTGTGGATATTAAGTTAGATGTACTCTGCTATTCTTCCAGGAAGCTTCCACTGAAATATGCAGTTTCAAGTTTAATCATACCTGGCTTAGTTGACCAATTAAATGTAGTGCAGAAGTTGATGTTGCCTAACCTTTTGGCACAACATCCTTGGCTAAAATCTTATCACTTTAGTCCTCCTGGGATTCTACATCCAATAACTGTTTTCTATGAACTGAGTTTTGGGGAGACAGAAATGAAGCAAGTTGAAGTTAGGAGATCCTTGCACTCAAGGTTGGGATTGCCGTATGATCGTCCCCTTCTAAGAATTTCTAATGCCTTGGATTTTTCAAAATTGAATAACAATGATATGGTCTCTCTACAGAAAGGTTCAACTTTGCTCAGAGATGTACACATTGGGATTCCAAGTAGTGGGGTTACTGGGGGAACTGTTTCCCTTGTTCAAGGTTCTTATGAATACTTCCATTATCTTCACGATGGTTATAATGATTCGGGGTGGGGTTGTGCTTACCGCTCTCTCCAGACTATCATTTCGTGGTTCAGACTTCAAAACTACACATCCATAGAAGTTCCTTCTCATAGGGAAATACAGCAGACTCTTGTTGAAATTGGTGATAAAGACCCTTCTTTTGTTGGATCACGAGATTGGATCGGTGCCATTGAATTGAGCTTTGTTTTGGACAAACTTCTGGGTGTTACGTGCAAAGTCATCAATGTTAGATCTGGAGCTGAGCTTCCGGAAAGATGTCGAGAGCTAGCGTTGCACTTTGAAAACCAAAGTACACCTGTTATGATTGGTGGTGGTGTACTTGCATATACACTCTTGGGAGTGGATTACAATGAAGCAAGTGGAGATTGTGCATTTTTAATACTCGATCCCCACTATACAGGTTCGGATGACCTAAAGAAAATAGTCAATGGAGGATGGTGTGGGTGGAAAAAGGCTGTTGATAGCAAGGGAAAGAATTTCTTCTTGCATGATAAGTTTTATAATCTGCTGCTGCCTCAGAGGCCCCACATGGTTTGA 1941 0.4575 MADDSNRLVRLLCRPKPLNTKGSDPGIHFWLIGSPFFPPLTVASFLRRIHALPSAASPDLPKESEDLRTLIPRGFEVVGALASGDDAHARAAVDAARTLRNLLYGEGTDRPVIGAVCGFDSGELRFFVSESENATGLESISSVIEERDSKKFVWENGCLLHCELPIKLPLYYSLKNPTDVEKSYVQATEAVIAKLRDPQAVYLLETSNKASQDISPPVIIRGLQLDFSTDLSKIKALADDDDGFDASSLSCSYFPISSKAGSPVFSAENADIIQVSVLFNSLGSSSASTVPVAEYFPVQEETRLLIVDIKLDVLCYSSRKLPLKYAVSSLIIPGLVDQLNVVQKLMLPNLLAQHPWLKSYHFSPPGILHPITVFYELSFGETEMKQVEVRRSLHSRLGLPYDRPLLRISNALDFSKLNNNDMVSLQKGSTLLRDVHIGIPSSGVTGGTVSLVQGSYEYFHYLHDGYNDSGWGCAYRSLQTIISWFRLQNYTSIEVPSHREIQQTLVEIGDKDPSFVGSRDWIGAIELSFVLDKLLGVTCKVINVRSGAELPERCRELALHFENQSTPVMIGGGVLAYTLLGVDYNEASGDCAFLILDPHYTGSDDLKKIVNGGWCGWKKAVDSKGKNFFLHDKFYNLLLPQRPHMV* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1471 646 PANTHER - 116 645 - -
Gso6g1471 646 ProSiteProfiles Rhodanese domain profile. 608 626 IPR001763 -
Gso6g1471 646 Pfam Peptidase family C78 448 638 IPR012462 -
Gso6g1471 646 Gene3D - 429 646 - -
Gso6g1471 646 SUPERFAMILY Cysteine proteinases 465 603 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1471 Gso-Chr6 14789891 14800616 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1471 K01376 - gmx:100811510 1285.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1471 6 14789891 14800616 Gso6g1471 6 14789891 14800616 ECH
Gso4g1613 4 45812672 45831223 Gso6g1471 6 14789891 14800616 GST