Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1455 ATGCAAGTCCTGCAAACCTCTTATCTCTTCACTTTCCCTAAACCCCTAAACCCTTCCCCTTCTCATTTCCACCACCGTCTTCCGCCACGCCCTCCGCCATTCTTCCACCGCCGCCCCCTCACCATTCCCAAATCCTTCAGCTCCGACGAGTTCCCGGTGGACGAGACCTTCCTGGAGAACTTCGGCCCCAAGGACAAAGAAACCGAGGACGAAGCCCGCCGCCGCAACTGGATCGAGCGCGGGTGGGCCCCATGGGAGGAAATCCTCACTCCGGAGGCCGATTTCGCGCGCAAGAGCCTCAACGAAGGCGAGGAGGTTCCCCTCCGCTCCCCGGAAGCCATCGAAGCGTTCAAAATGCTAAACCCTAACTACCGCAAGAAGAAAAGGGAGGAAATGGGACTCACCGAGGAAGAGTTCTTCGCGAAGCAGTTCGAGATCAAGGGCGAGATTCCGGAGCCTCTCGTGACGACGTGGGCGGGGCCGCTGGTGGTGCGCCTCGTGCCGCCACGCGATTGGCCGCCTCGTGGGTGGCGCGTGGACCAGGAGGAGCTCGCGTTCATCCGCGAGGCGCATAAGGTGCAGGCGAGGAGGGTGAGGCTGGAGGAGGTGGAGAGCGGAGTGAGGACTGACACTGATGACGTGGGCTTGGATAGGTATAGGGTGTTTCTCAAGCAGTATAAGGAATGGGTCGAGGCTAACAAGGATAGGTTGGAAGAGGAGTCTTATAAGCAAGACCAAGATTATTACCCCGGTAGAAGGAAAAGAGGGAAGGACTACAAGGAGGGCATGTACGAGCTTCCGTTCTATTATCCTGGCCAAATTTGTGTAGGGAAGGTGACAATGTTGCATCTCTATCAAGGGGCATTTGTTGACATTGGCGGGGTACATGATGGGTGGGTTCCTATAAAGAACAATGATTGGTATTGGCTTCGCCATCACATAAAAGTGGGTATGCACGTCATTGTTGAAATTACGGCAAAGCGAGATCCTTATCGCTTCCGCTTTCCTATCGAACTTCGTTTTGTTGATCCAAATATAGACCATCTAATCTTTAACAAATTTGACTTCCCACCAATATTTCATCGTGATGAAGATACTAATGAAGATGAAATACGGCGTGACTGTGGAAGACCTCCTGTTCCTAGGAAAGATCCAGGAGACAAACCAGAGGAAGAACCTCTATTGTCTAATCATCCATATGTCGAGAAGCTCCATGTTAAACTAAGGAAGGAAGCAGCGGACAGAGGTGAGAAATACAAAATTACCAAACTGAGGCGCAATGTTGAGATGGATGAGTATGACTACATGCATTGGCGTAGATCATTTGAGGAAAGAGAAGCATTGACTAGAGACATCAGCTGTCGCAAAGCTCTTGGTCTGCCATTGGAAGAGCCAGGAAGATATATGGATGCTAGTTTTTTTGGTAAAGATCAATATGATCCTACAAGTCCTCTGTATCGTTATGACTACTGGGGGGAACCCAAGAATTCGGAGAAGAGCATGCAAGAGCGGATGACAGATCTCCATAACAAAAAAATCGTGGGCAAGGGCAATGTTTGGTACGAAATGTCATATGAAGATTGCATCCAGCAACAGATGGAAAGTGAAGCCCAGTCTAAGGAGCAAGAAAACGATGAAGATACAAGGCAAGGTCAAGCTGATGAAGATGAGGATGACGAGGATGATGATGATGATTTTGACTTCAGTATTCTGAGCAGTTTCGGTAGTAATTTCTCCGATCAGCCTCATGTTAATGGGACCGAGTCTTCTACAATATCAGGTGAGGGCATGTTTGAGGATTGA 1803 0.4964 MQVLQTSYLFTFPKPLNPSPSHFHHRLPPRPPPFFHRRPLTIPKSFSSDEFPVDETFLENFGPKDKETEDEARRRNWIERGWAPWEEILTPEADFARKSLNEGEEVPLRSPEAIEAFKMLNPNYRKKKREEMGLTEEEFFAKQFEIKGEIPEPLVTTWAGPLVVRLVPPRDWPPRGWRVDQEELAFIREAHKVQARRVRLEEVESGVRTDTDDVGLDRYRVFLKQYKEWVEANKDRLEEESYKQDQDYYPGRRKRGKDYKEGMYELPFYYPGQICVGKVTMLHLYQGAFVDIGGVHDGWVPIKNNDWYWLRHHIKVGMHVIVEITAKRDPYRFRFPIELRFVDPNIDHLIFNKFDFPPIFHRDEDTNEDEIRRDCGRPPVPRKDPGDKPEEEPLLSNHPYVEKLHVKLRKEAADRGEKYKITKLRRNVEMDEYDYMHWRRSFEEREALTRDISCRKALGLPLEEPGRYMDASFFGKDQYDPTSPLYRYDYWGEPKNSEKSMQERMTDLHNKKIVGKGNVWYEMSYEDCIQQQMESEAQSKEQENDEDTRQGQADEDEDDEDDDDDFDFSILSSFGSNFSDQPHVNGTESSTISGEGMFED* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1455 600 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 36 405 IPR044967 GO:0000427|GO:0003723
Gso6g1455 600 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 404 586 IPR044967 GO:0000427|GO:0003723
Gso6g1455 600 MobiDBLite consensus disorder prediction 570 594 - -
Gso6g1455 600 Coils Coil 530 550 - -
Gso6g1455 600 MobiDBLite consensus disorder prediction 548 568 - -
Gso6g1455 600 MobiDBLite consensus disorder prediction 532 600 - -
Gso6g1455 600 SUPERFAMILY Nucleic acid-binding proteins 268 327 IPR012340 -
Gso6g1455 600 ProSiteProfiles S1 domain profile. 272 340 IPR003029 GO:0003676
Gso6g1455 600 MobiDBLite consensus disorder prediction 367 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1455 Gso-Chr6 14501430 14509518 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1455 - - gmx:100783002 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1455 6 14501430 14509518 Gso6g1455 6 14501430 14509518 ECH
Gso4g1634 4 46122150 46129106 Gso6g1455 6 14501430 14509518 GST