Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1451 ATGGCGGCGAAGCTAGACACCCACGCCGTGGCTTCCGATCTGATCGACTTCCTCAACGCTTCTCCAACGGCTTTCCACGCCGTCGACGAGGCAAAGAGGCGTTTGCGTAGCGCGGGGTACCACCAACTCTCTGAGAGGGAAGTGTGGGAACTGCAACCGGGCAACAAGTACTTCTTCACCAGAAATCACTCCACCATCGTCGCCTTCGCCATCGGCAAAAAGTACGTTGCTGGAAATGGATTCTACATAATTGGGGCTCACACGGATAGTCCTTGTCTCAAACTCAAGCCTGTCACCAAGGTTGTTAAGGCTGGGATTTTGGAGGTTGGTGTCCAAACCTATGGAGGTGGTCTGTGGCACACGTGGTTTGATCGAGACTTGACTGTGGCGGGGAGGGTCATTGTGCGGGAAGAGAATGCTGGTTCTGTTTCGTACTCACATCGCCTTGTTAGAATTGAGGAACCTATAATGCGAATACCGACTTTGGCAATTCACTTGGACAAGACTGTTAATGATGGATTCAAATTTAACAACGAGAATCACCTTATTCCCATCTTGGCAACATCGCTGAAGGGTGAGCTCAATAAAGTGTCCTCTGAAAATGGTCCTGTTGAAAGTGGAAATCAGACCGATGGAAAGAAAGCAAATGATAAAACAGGCACCAGCAATACGAAGCATCACCTTCTTCTTCTACAGTTGCTTGCAAGCAAGCTTGGGTGTGAACCAGATGACATATGTGATTTTGAATTGCAAGCTTGCGATACACAACCAAGTACTATTGCTGGAGCTGCAAAGGAATTCATTTTTTCAGGACGGCTAGATAATCTCTGCATGTCATTTTGCTCGCTGAAGGCATTAATAGATGCTACATCTTCTGACAGCAGTCTTGAGGAAGAGTCAGGTGTTAGAATGGTGGCTTTATTTGACCATGAGGAAGTTGGATCTAACTCTGCCCAAGGAGCTGGCTCTCCTGTTATGCTAAATGCTGTGACTAGGGTTACCAATTCCTTCAGCTCCAATCCCAACCTTCTGGAGAAAGCAGCACAATTAAGCTACCTTGTATCTGCCGACATGGCACATGCACTACACCCAAATTACATGGACAAGCATGAAGCAAACCATCAGCCCAAACTACATGGAGGACTTGTCATTAAAACCAATGCAAGCCAACGCTATGCAACCAATGTTGTCACATCCTTCATATTCAGGGAGATAGCATCAAAACATAAACTTCCCGTTCAGGACTTTGTGGTGCGCAATGACATGTCATGTGGTTCAACCATTGGTCCTATTCTTGCTAGTGGCGTAGGTATTCGCACTGTTGATGTAGGTGCACCGCAGTTGTCAATGCATAGCATACGAGAAATTTGTGCTGTTGATGATGTGAAGTATTCATATGAGCACTTCAAGGCATTTTACCAAGAATTCTCTCATGTTGATGGTAAGATGGTCGTGGATATATAG 1464 0.4611 MAAKLDTHAVASDLIDFLNASPTAFHAVDEAKRRLRSAGYHQLSEREVWELQPGNKYFFTRNHSTIVAFAIGKKYVAGNGFYIIGAHTDSPCLKLKPVTKVVKAGILEVGVQTYGGGLWHTWFDRDLTVAGRVIVREENAGSVSYSHRLVRIEEPIMRIPTLAIHLDKTVNDGFKFNNENHLIPILATSLKGELNKVSSENGPVESGNQTDGKKANDKTGTSNTKHHLLLLQLLASKLGCEPDDICDFELQACDTQPSTIAGAAKEFIFSGRLDNLCMSFCSLKALIDATSSDSSLEEESGVRMVALFDHEEVGSNSAQGAGSPVMLNAVTRVTNSFSSNPNLLEKAAQLSYLVSADMAHALHPNYMDKHEANHQPKLHGGLVIKTNASQRYATNVVTSFIFREIASKHKLPVQDFVVRNDMSCGSTIGPILASGVGIRTVDVGAPQLSMHSIREICAVDDVKYSYEHFKAFYQEFSHVDGKMVVDI* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1451 487 PANTHER ASPARTYL AMINOPEPTIDASE 4 486 IPR001948 GO:0004177|GO:0006508|GO:0008270
Gso6g1451 487 CDD M18_DAP 11 474 - -
Gso6g1451 487 SUPERFAMILY Aminopeptidase/glucanase lid domain 93 251 - -
Gso6g1451 487 Gene3D Aminopeptidase i, Domain 2 91 256 IPR023358 GO:0004177
Gso6g1451 487 Pfam Aminopeptidase I zinc metalloprotease (M18) 17 473 IPR001948 GO:0004177|GO:0006508|GO:0008270
Gso6g1451 487 MobiDBLite consensus disorder prediction 197 221 - -
Gso6g1451 487 Gene3D Zn peptidases 14 472 - -
Gso6g1451 487 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 81 97 IPR001948 GO:0004177|GO:0006508|GO:0008270
Gso6g1451 487 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 114 134 IPR001948 GO:0004177|GO:0006508|GO:0008270
Gso6g1451 487 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 308 326 IPR001948 GO:0004177|GO:0006508|GO:0008270
Gso6g1451 487 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 351 367 IPR001948 GO:0004177|GO:0006508|GO:0008270
Gso6g1451 487 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 440 455 IPR001948 GO:0004177|GO:0006508|GO:0008270
Gso6g1451 487 SUPERFAMILY Zn-dependent exopeptidases 8 474 - -
Gso6g1451 487 PANTHER ASPARTYL AMINOPEPTIDASE 4 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1451 Gso-Chr6 14466657 14473806 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1451 K01267 - gmx:100781379 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1639 4 46166087 46176863 Gso6g1451 6 14466657 14473806 GST