Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1438 ATGGAAGGGTTTTTTGGAAATTGCTTCAATATGATTTTGCTGATGTTGTGCTTCACCAACTTGAGCATAGCTTTTGCTCATAGTCATATGAATGGATTTGGAGAGCAGCCACTGGCCAAGATTGCCATTCACAAGACCGTTTTGGCGCTACACAGTTCTGCTTCCATTATAGCAGTCCCTTTTGTGCTAGGAACTAAGGGTGAGGATACCCAATGGGTGACTGTAGAGCTAGAGTCCCCAATACCATCTGTTGATGACTGGGTCGGAGTTTTTTCTCCAGCAAACTTCAATTCAGCAACATGTCCTGACACTGACGGCATTGGCTGGGTAGAGGAACCATACATATGCACAGCCCCAATAAAGTACAAGTATGCCAACTACTCTAACCGAAACTATGCAAAGACCGGGAAAGCTATTTTGAAGTTCCAGTTGATCAATCAACGTGCAGATTTCTCATTTGCACTATTTTCAGGTGGATTATCCGATCCTAGACTTGTGGCAATTTCGAATTCCATATCATTTGCAAATCCTAAAGCACCTGTGTATCCGCGCCTTGCTCTAGGAAAATCTTGGGATGAAATGACAGTTACATGGACAAGTGGATATGACATAAATGAAGCTGTGCCTTTTGTTGAGTGGGGACCAAAGGGAGGAAAGAAAACACGATCTCATGCTGGAACATTGACATTTAACCGAAACAGCATGTGTGGTGAACCTGCACGAACTGTTGGTTGGCGTGACCCTGGTTTTATACACACAAGTTTCTTAAAAGAACTGTGGCCAAATTTTAGGTACACTTACAAGTTGGGGCATATGCTGTCTAACGGTTCTTATGTATGGAGTAAGAAGTATTCATTCAAGGCATCCCCATATCCTGGACAGAACTCTTTGCAACGTGTTATCATATTTGGTGACATGGGAAAGGCTGAGCGTGATGGTTCAAATGAATATGCTGATTATCAACCGGGTTCTCTAAACACCACAGACCAACTCGTCAAGGATTTAGAAAATTATGACATTGTTTTCCACATAGGAGACATGCCTTATGCAAATGGATACATCTCACAATGGGACCAATTCACAGCTCAAGTGCAAGAAATTTCGTCAACAGTACCATACATGATTGCAAGTGGAAATCATGAACGTGACTGGCCAAACACAGGATCATTCTATGATACTCCAGATTCAGGTGGAGAATGTGGAGTCCCTGCAGAAACCATGTATTATTTTCCTGCTGAGAATAGAGCCAAATTCTGGTATAAAGCAGATTATGGCCTGTTTCGTTTCTGCATAGCAGATAGTGAACATGACTGGAGAGAAGGATCAGAACAATACAAATTCATTGAGCATTGTCTTGCAACAGTAGATAGAAAGCATCAACCATGGCTAATCTTTTCAGCTCATCGTCCCCTTGGCTACTCCTCTAATCTTTGGTATGGCATGGAGGGTTCATTTGAAGAGCCCATGGGAAGGGAAAGTTTGCAGAAGCTTTGGCAAAAGTACAAAGTAGACATTGGATTTTATGGTCATGTCCATAACTATGAAAGAGTATGCCCCATTTATCAGAATCAATGTGTGAATGAAGAAAAGCATCACTACTCTGGCACTGTGAATGGAACAATTCATGTGGTTGTTGGTGGAGGGGGAAGTCACCTGTCAGACTTCACACCATCACCCCCTATTTGGAGTCTTTATAGGGACGTTGACTATGGGTTTGGCAAATTGACTGCTTTCAATCATTCATATCTCTTGTTTGAGTACAAGAAAAGTAGTGATGGAGAGGTCTACGACTCCTTTACCATTTCAAGAGACTACAGAGATGTTTTGGCCTGTGTGCACGATGGTTGTGAGAAAACTACTCTAGCAACATGA 1872 0.4225 MEGFFGNCFNMILLMLCFTNLSIAFAHSHMNGFGEQPLAKIAIHKTVLALHSSASIIAVPFVLGTKGEDTQWVTVELESPIPSVDDWVGVFSPANFNSATCPDTDGIGWVEEPYICTAPIKYKYANYSNRNYAKTGKAILKFQLINQRADFSFALFSGGLSDPRLVAISNSISFANPKAPVYPRLALGKSWDEMTVTWTSGYDINEAVPFVEWGPKGGKKTRSHAGTLTFNRNSMCGEPARTVGWRDPGFIHTSFLKELWPNFRYTYKLGHMLSNGSYVWSKKYSFKASPYPGQNSLQRVIIFGDMGKAERDGSNEYADYQPGSLNTTDQLVKDLENYDIVFHIGDMPYANGYISQWDQFTAQVQEISSTVPYMIASGNHERDWPNTGSFYDTPDSGGECGVPAETMYYFPAENRAKFWYKADYGLFRFCIADSEHDWREGSEQYKFIEHCLATVDRKHQPWLIFSAHRPLGYSSNLWYGMEGSFEEPMGRESLQKLWQKYKVDIGFYGHVHNYERVCPIYQNQCVNEEKHHYSGTVNGTIHVVVGGGGSHLSDFTPSPPIWSLYRDVDYGFGKLTAFNHSYLLFEYKKSSDGEVYDSFTISRDYRDVLACVHDGCEKTTLAT* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1438 623 SUPERFAMILY Metallo-dependent phosphatases 299 614 IPR029052 -
Gso6g1438 623 Pfam Fn3-like domain from Purple Acid Phosphatase 57 176 IPR040974 -
Gso6g1438 623 Pfam Calcineurin-like phosphoesterase 299 514 IPR004843 GO:0016787
Gso6g1438 623 Pfam Iron/zinc purple acid phosphatase-like protein C 539 598 IPR025733 -
Gso6g1438 623 Pfam Purple acid Phosphatase, N-terminal domain 184 287 IPR015914 GO:0003993|GO:0046872
Gso6g1438 623 PANTHER PURPLE ACID PHOSPHATASE-RELATED 9 622 - -
Gso6g1438 623 PANTHER PURPLE ACID PHOSPHATASE 9 622 - -
Gso6g1438 623 Gene3D - 179 292 - -
Gso6g1438 623 SUPERFAMILY Purple acid phosphatase, N-terminal domain 159 290 IPR008963 GO:0003993|GO:0046872
Gso6g1438 623 CDD MPP_PAPs 298 603 IPR041792 -
Gso6g1438 623 Gene3D - 293 607 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1438 Gso-Chr6 14333381 14342191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1438 47 601 Miscellaneous Gene Families AT1G13900 29.325 1.54e-58 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1438 K22390 - gmx:100775672 1293.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1438 6 14333381 14342191 Gso6g1438 6 14333381 14342191 ECH