Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1430 ATGGCGGCCACAGCTTCCAGAACCACCCCATTCTCTTCTCCCTCTTCCTCTTCACACCCCACCTTCCCCAAACGCATTGCTAGATCCACCCTCCCTCTCTCTCATCAAACCTTCATTAAACCCAACCACGCGCTCAAAATCAAATGTTCCATCTCCAAACCCCCCTCGCCGCCGGCCACCACCACCACTGCAGCGCCGGCAACATCAGAGCCCTTCGTGTCGCGGTTCGCCTCCGCTGAACCGCGCAAGGGCTCGGACATCCTTGTGGAGGCCCTTGAGCGGCTGGGCGTGACTAATGTCTTCGCCTACCCCGGCGGCGCGTCGATGGAGATCCACCAGGCTCTCACGCGCTCCTCCACCATCCGCAACGTCCTCCCTCGCCACGAGCAGGGCGGCATCTTCGCCGCCGAGGGCTACGCGCGCTCCTCTGGCCTCCCCGGCGTCTGCATCGCCACCTCCGGCCCCGGCGCCACCAACCTCGTCAGCGGCCTCGCCGACGCCTTAATGGACAGCGTCCCCGTCGTCGCCATCACCGGCCAGGTCCCCCGGCGCATGATTGGCACCGACGCCTTCCAAGAAACCCCCATCGTCGAAGTCACCAGATCCATCACCAAGCACAACTACCTCATCCTCGACGTCGACGACATTCCCCGCATCGTCGCCGAAGCCTTCTTCGTCGCCACCTCCGGCCGCCCCGGCCCGGTCCTCATCGACATCCCCAAAGACGTCCAACAGCAACTCGCCGTGCCTAATTGGGACGAGCCCATCAACCTCCCCGGGTACCTCGCCAGGCTTCCCAGGCCCCCCACCGAGGCCCAATTAGAGCACATTGTCAGACTCATAACCGAGGCCCAAAAGCCCGTCCTCTACGTCGGAGGTGGCAGTTTGAATTCCAGTGATGAATTGAGACGCTTTGTGGAACTGACTGGTATTCCCGTTGCTAGCACTTTAATGGGCCTTGGAACTTATCCTATTGGGGATGAATATTCCCTTCAAATGTTGGGTATGCATGGTACTGTTTATGCTAACTATGCTGTTGACAATAGTGATTTGTTGCTTGCCTTTGGGGTAAGGTTTGATGACCGTGTTACTGGGAAGCTTGAGGCTTTTGCTAGTAGGGCTAAGATTGTTCACATTGATATTGATTCTGCTGAAATTGGAAAGAATAAGCAGGCGCATGTGTCGGTTTGCGCGGATTTGAAGCTGGCCTTGCAGGGGATTAATATGATTTTGGAGAAAAAAAGAGTGGGGGGTGGTAAGCTTGATCTTGGAGGCTGGAGGGAAGAGATTAATGTGCAGAAACACAAGTTTCCATTGGGTTACAAAACATTCCAGGACGCCATTTCCCCGCAGCATGCTATTGAGGTTCTTGATGAGTTGACAAATGGGGATGCTATTGTTAGTACTGGGGTTGGGCAGCATCAAATGTGGGCTGCACAGTTTTACAAGTACAAGAGACCGAGGCAGTGGTTGACCTCGGGGGGTCTTGGAGCCATGGGTTTTGGATTGCCTGCGGCTATTGGCGCTGCTGTTGCTAACCCCGGCGCTGTTGTGGTTGACATTGATGGAGATGGTAGTTTCATCATGAATGTTCAAGAATTGGCAACTATAAGAGTGGAGAATCTTCCTGTTAAGATATTGTTGTTGAATAATCAGCATTTGGGCATGGTGGTTCAGTGGGAGGATCGGTTCTACAAGTCCAATAGAGCTCACACCTATCTTGGAGACCCGTCTAGCGAGAATGAGATATTCCCAAACATGCTCAAGTTTGCTGAGGCTTGTGGGATACCGGCAGCGCGTGTGACGAAGAAGGAAGAGCTTAGAGCAGAAATTCAGAAAATGTTGGACACCCCTGGCCCCTACCTTCTTGATGTCATTGTGCCACATCAGGAGCATGTGTTGCCGATGATTCCCAGTAATGGATCCTTCAAGGATGTGATAACGGAGGGAGACGGTAGAACGAGGTACTGA 1971 0.5424 MAATASRTTPFSSPSSSSHPTFPKRIARSTLPLSHQTFIKPNHALKIKCSISKPPSPPATTTTAAPATSEPFVSRFASAEPRKGSDILVEALERLGVTNVFAYPGGASMEIHQALTRSSTIRNVLPRHEQGGIFAAEGYARSSGLPGVCIATSGPGATNLVSGLADALMDSVPVVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLILDVDDIPRIVAEAFFVATSGRPGPVLIDIPKDVQQQLAVPNWDEPINLPGYLARLPRPPTEAQLEHIVRLITEAQKPVLYVGGGSLNSSDELRRFVELTGIPVASTLMGLGTYPIGDEYSLQMLGMHGTVYANYAVDNSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQAHVSVCADLKLALQGINMILEKKRVGGGKLDLGGWREEINVQKHKFPLGYKTFQDAISPQHAIEVLDELTNGDAIVSTGVGQHQMWAAQFYKYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPGAVVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVVQWEDRFYKSNRAHTYLGDPSSENEIFPNMLKFAEACGIPAARVTKKEELRAEIQKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFKDVITEGDGRTRY* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1430 656 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 470 625 IPR011766 GO:0003824|GO:0030976
Gso6g1430 656 Gene3D - 440 626 - -
Gso6g1430 656 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 80 259 IPR029061 -
Gso6g1430 656 Gene3D - 72 265 - -
Gso6g1430 656 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 49 655 IPR045229 -
Gso6g1430 656 Gene3D - 274 439 - -
Gso6g1430 656 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 83 648 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Gso6g1430 656 MobiDBLite consensus disorder prediction 1 24 - -
Gso6g1430 656 PANTHER ACETOLACTATE SYNTHASE 49 655 - -
Gso6g1430 656 CDD TPP_AHAS 448 639 IPR039368 GO:0030976
Gso6g1430 656 ProSitePatterns Thiamine pyrophosphate enzymes signature. 507 526 IPR000399 GO:0000287|GO:0030976
Gso6g1430 656 Pfam Thiamine pyrophosphate enzyme, central domain 275 405 IPR012000 GO:0000287|GO:0030976
Gso6g1430 656 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 447 647 IPR029061 -
Gso6g1430 656 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 83 246 IPR012001 GO:0030976
Gso6g1430 656 SUPERFAMILY DHS-like NAD/FAD-binding domain 270 438 IPR029035 -
Gso6g1430 656 CDD TPP_PYR_POX_like 86 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1430 Gso-Chr6 14251703 14254092 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1430 K01652 - gmx:100798203 1239.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1430 6 14251703 14254092 Gso6g1430 6 14251703 14254092 ECH
Gso4g1655 4 46385793 46388342 Gso6g1430 6 14251703 14254092 GST