Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1418 ATGACATCAATGGTGGCACCCATCAACATGCGGCTACAATTTCGGGGAAATTGGTGCAATGCCAACAAGGGAGGGGAGTTTTTGAAGCCAAGCTTTAATTCCTCATGCAACACTAATAATACATTGAACAATAAACGAAGATTTTCATTGCTGGTGATCACTGCAAGTTCTCAATGTAGTCCTGGGGGAATGAACACAATCAAAGGAATGAAACATGTTCCATTGGTTCATCTCGCAGCAGGCAAGTTGGCAAATGAAATTAGCAGAGAACATATTGTTACCTTGTTTCGTGGAAGGTTTGTGGAGGACAGGTTTGTATATAGGCAGACTTTCTTTGTTAGGTGCTACGAAATTGGACCAGATAAAACTATCACCATGGAGACACTCATGAATTTTCTCCAGGAAACTGCTTTAAACCATGTCTCCAGCTGTGGGGGAAGTCAGAACGGTTTTGGAGCTACTCAGGAAATGGACCTTCGCAATCTCATTTGGGTTGTTACTCGTTTTCAAGTTCAAGTACAGAGATATAGCAAATGGAGGGATGAAATTGAGGTTGAAACTTGGTTTGATGTTGCCGGAAAGAATGGAACGCGAAGAGATTGGATAGTCAGGGACCATTACACCAAAGAGATTATAGCTAAAGCAACCAGCATATGGGCAATCGTGAATCAAGAAACAAGAAGATTATGCAAGATACCTGAAGAAGTTAGACAAGAACTTGTTACTTTCTACTTTAATAGGTTTGCCATCGCCAGGGAAGAAATAGATCATCAGAAGATACAAAAGCTCACTGATGACACTGCTGAGAGTTTTCGATTTGGTGTGACTCCAGGGAGGAACGACATGGATGTTAACCAGCATGTTAACAATGTAAAATACATCACATGGATCTTAGAGAGCGTGCCAAGAGAAGTATTAGAAGATTACAAAATGACAAGCATTACTTTGGAGTTTCGGCGTGAATGTACTCTATCAGATTTGTTGGAGTCATTGATAGGTCCATCCTCCAGCGTGATTGGTGCCTCTGATAATAACTCTATCAACAGAAAACCCGGCCTGCAATATATACACCTGCTTCGTCTACAAGACAATAAAGCCGAGTTGGTCCGAGCCAGAACAGATTGGCATCTTAAGTAA 1137 0.4142 MTSMVAPINMRLQFRGNWCNANKGGEFLKPSFNSSCNTNNTLNNKRRFSLLVITASSQCSPGGMNTIKGMKHVPLVHLAAGKLANEISREHIVTLFRGRFVEDRFVYRQTFFVRCYEIGPDKTITMETLMNFLQETALNHVSSCGGSQNGFGATQEMDLRNLIWVVTRFQVQVQRYSKWRDEIEVETWFDVAGKNGTRRDWIVRDHYTKEIIAKATSIWAIVNQETRRLCKIPEEVRQELVTFYFNRFAIAREEIDHQKIQKLTDDTAESFRFGVTPGRNDMDVNQHVNNVKYITWILESVPREVLEDYKMTSITLEFRRECTLSDLLESLIGPSSSVIGASDNNSINRKPGLQYIHLLRLQDNKAELVRARTDWHLK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1418 378 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 79 378 IPR045023 GO:0006633|GO:0016297
Gso6g1418 378 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 268 375 IPR029069 -
Gso6g1418 378 CDD 4HBT 105 223 - -
Gso6g1418 378 Gene3D Hotdog Thioesterase 98 378 - -
Gso6g1418 378 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 101 247 IPR029069 -
Gso6g1418 378 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 79 378 - -
Gso6g1418 378 Pfam Acyl-ACP thioesterase 106 376 IPR002864 GO:0006633|GO:0016790
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1418 Gso-Chr6 14098274 14102099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1418 98 378 Acyl Lipid Metabolism Gene Families AT1G08510 50.178 3.71e-93 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1418 K10781 - gmx:100795014 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1667 4 46548001 46551674 Gso6g1418 6 14098274 14102099 GST