Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1416 ATGGCCTCCGAAGCCCTAGAAGATAACAAGCCTCCCCTCCAGGACGACAATCACGCCAAATCGGAGATTCCCGAGAAAGACGCTTCCTCGGACGCCGTCGCGGCGAAATCCGAGAACGCGAATGCCGGCGATAAAGACGGAGGAGCAGCTGGCAATCAGGAAGTAGAAGAGGAAGCCGACGCCGCTGAGGAGAAGAAAGAAGAGATCGACGAAGACGGAGAGGAGAAAGATGAACAAGAAGAAAAAGAGGAGGAAGACGAAGCGGAAGAGAAGGCGAAGGGTAAGGGTAAGAGGAGGAGGAGTAAGAAGGATCCGGTTACGCCGGCGCCGAGTGAGAGGCCCACGAGGGAGAGGAAAACGGTGGAGCGCTTCTCTGTGCCCTCTCCGGCGAAGTCTGCAAGGTCCTCCGCTAGTAAAGGTTTAATAATTGAAAAGGGACGTGGCACTCAGCTCAAGGATATCCCAAACGTGGCTTTCAAGTTGTCAAAGAGAAAACCTGATGACAACCTGCATATGCTTCATACTTTACTGTTTGGAAAGAAAACAAAGGCACACAATTTAAAGAGAAATATAGGCCAGTTTTCTGGTTATGTGTGGACTGAAAATGAGGACAAACAGAGGGCCAAGATAAAGGAGAAGATTGACAAATTTGTCAAAGAAAAGTTGTTGGACTTCTGTGATGTTCTTAATATTCAAGTAAACAAGACCAATGTGAAGAAGGAGGAGCTATCTGCAAAGTTGTTGGAATATTTGGAGTCCCCACATGCTACAACTGATATTCTACTTGCTGATAAAGAGCAGAAAGGTAAAAAGAGAACCAGAAAGTCATTCCCTAGCAAATCTCCTGGGGAAGCATCTACAGAGACACCTGCCAAGAAGCAAAAACAAACTTCCCAATCTGGGAAAAAGCAAAAGCAGTCTTCTGATGATGATGAGGATGATAAAGCTGAACTTTCAGATGCAAAAGGTGTTTCTCAGGAAGATGAAGATGTTGCAGTACCGAACAATGAAAGTGATGATGAGGAAAGTAGATCAGAGGAAGAGGAAGAGAAATCAAAGTCTCGCAAGCGTACTTCCAAAAAAGCTGTTAAAGAGAGTTCAGTTAGCAAAGCTGATAGAACCTCATCTGTCAAGAAGACCCCTGTGAAAGATGCCAAGAGCATTGAAAAAACTAAAAAGAAACCAACTTCAAAAAAGGGTGTTGCTGAGCATGACAGTGCTTCTGCCTCTGTTTCCAAGTTGAAGCAACCTGCATCCAAGAAACAGAAAACTGCAAGTGAAAAGCAGGACACTAAGGGGAAGGCTGCAAGCAAAAAACGAACTGACAAATCTTCAAAGGCTTTGGTTAAGGATCAAGGGAAAAGTAAAAGTAATAAGAAGGCCAAGGCAGAACCTACTAAGCAGGACATGCATGCTGTAGTTGTTGATATTCTGAAGGAAGTAGATTTCAATACTGCAACTTTGTCCGATATCCTCAGGCAACTTGGTACCCACTTTGGTATGGATTTAATGCATAGAAAAGCAGAGGTGAAGGATATAATTACAGATGTAATTAATAACATGTCTGATGAAGAAGAGGCTGAGAATGATGGTGACACAGATAAAGATGATGATGGTGATGATGATGATGATGCGTGA 1638 0.4402 MASEALEDNKPPLQDDNHAKSEIPEKDASSDAVAAKSENANAGDKDGGAAGNQEVEEEADAAEEKKEEIDEDGEEKDEQEEKEEEDEAEEKAKGKGKRRRSKKDPVTPAPSERPTRERKTVERFSVPSPAKSARSSASKGLIIEKGRGTQLKDIPNVAFKLSKRKPDDNLHMLHTLLFGKKTKAHNLKRNIGQFSGYVWTENEDKQRAKIKEKIDKFVKEKLLDFCDVLNIQVNKTNVKKEELSAKLLEYLESPHATTDILLADKEQKGKKRTRKSFPSKSPGEASTETPAKKQKQTSQSGKKQKQSSDDDEDDKAELSDAKGVSQEDEDVAVPNNESDDEESRSEEEEEKSKSRKRTSKKAVKESSVSKADRTSSVKKTPVKDAKSIEKTKKKPTSKKGVAEHDSASASVSKLKQPASKKQKTASEKQDTKGKAASKKRTDKSSKALVKDQGKSKSNKKAKAEPTKQDMHAVVVDILKEVDFNTATLSDILRQLGTHFGMDLMHRKAEVKDIITDVINNMSDEEEAENDGDTDKDDDGDDDDDA* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1416 545 Coils Coil 52 91 - -
Gso6g1416 545 MobiDBLite consensus disorder prediction 347 401 - -
Gso6g1416 545 MobiDBLite consensus disorder prediction 56 87 - -
Gso6g1416 545 MobiDBLite consensus disorder prediction 304 327 - -
Gso6g1416 545 MobiDBLite consensus disorder prediction 1 139 - -
Gso6g1416 545 MobiDBLite consensus disorder prediction 420 470 - -
Gso6g1416 545 Gene3D - 456 520 - -
Gso6g1416 545 PANTHER DEK PROTEIN 36 543 IPR044198 GO:0003677|GO:0006325
Gso6g1416 545 MobiDBLite consensus disorder prediction 103 124 - -
Gso6g1416 545 MobiDBLite consensus disorder prediction 279 303 - -
Gso6g1416 545 MobiDBLite consensus disorder prediction 9 32 - -
Gso6g1416 545 MobiDBLite consensus disorder prediction 332 346 - -
Gso6g1416 545 MobiDBLite consensus disorder prediction 261 470 - -
Gso6g1416 545 PANTHER OS01G0924900 PROTEIN 36 543 - -
Gso6g1416 545 SUPERFAMILY DEK C-terminal domain 458 519 - -
Gso6g1416 545 MobiDBLite consensus disorder prediction 519 545 - -
Gso6g1416 545 Pfam DEK C terminal domain 465 517 IPR014876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1416 Gso-Chr6 14068797 14074616 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1416 K17046 - gmx:100813123 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1416 6 14068797 14074616 Gso6g1416 6 14068797 14074616 ECH