Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1409 ATGGCCATTAACCATGAAACTTGGGCTTTCGTTTTCGGCCTTCTAGGCAACGTGATCTCCTTTATGGTGTTCCTCGCTCCATTACCGACTTTTTACCAAATCTACAAGAAGAAATCTACAGAAGAGTTCCAATCACTACCTTATGTTGTTGCATTGTTCAGTTCAATGCTTTGGATCTATTACGCACTCGTCAAAAAGGATGCTAGCCTCCTTCTCATTACTATTAACTCCTTTGGATGTGTGATAGAGACGATATACCTTGCAATCTTCCTAATTTACGCCCCAAGCAAAACCAGGCTTTGGACCATCAAGCTTCTTCTCATGTTGAATGTTTTTGGATTCGGAGCGATGCTTCTTTCAACCCTCTACCTTACAACAGGATCCAAACGTCTTACTGTGATAGGATGGATTTGCCTTGTTTTCAACATAAGCGTTTTTGCTGCTCCTCTATGCATTATAAAACGTGTCATAAAGACGAAGAGCGTGGAATTCATGCCTTTCAGTTTGTCCTTCTTTTTGACCATAAATGCTGTCATGTGGTTCTTCTATGGCCTTCTCCTCAAGGACTATTACGTCGCTCTACCAAATACGCTTGGGTTTCTATTCAGCATAATTCAGATGGTGTTGTATTTGATTTATAGAAACGCCAAGACACCTGATCTGCCAATGAAATTGCAAGAACTAAATAGTCATACTATTGACGTTGGGAAGCTGAGCAGAATGGAACCCTCTGAGCCGAATCATGTAACAAAAAATGGTACTTTAACTGAAAGAGAAATCTGA 783 0.4049 MAINHETWAFVFGLLGNVISFMVFLAPLPTFYQIYKKKSTEEFQSLPYVVALFSSMLWIYYALVKKDASLLLITINSFGCVIETIYLAIFLIYAPSKTRLWTIKLLLMLNVFGFGAMLLSTLYLTTGSKRLTVIGWICLVFNISVFAAPLCIIKRVIKTKSVEFMPFSLSFFLTINAVMWFFYGLLLKDYYVALPNTLGFLFSIIQMVLYLIYRNAKTPDLPMKLQELNSHTIDVGKLSRMEPSEPNHVTKNGTLTEREI* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1409 260 Gene3D - 11 98 - -
Gso6g1409 260 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 258 - -
Gso6g1409 260 PANTHER RAG1-ACTIVATING PROTEIN 1 4 258 - -
Gso6g1409 260 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Gso6g1409 260 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Gso6g1409 260 Gene3D - 128 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1409 Gso-Chr6 14000323 14003187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1409 1 244 Miscellaneous Gene Families AT5G50800 58.537 6.54e-101 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1409 K15382 - gmx:100127405 518.079