Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1407 ATGTTTGCAGTGCAGCCTCCGGCACCGGCGAACTCCGAAGGCGGTGCTGCCGGAGATGCTCCTCTGGTCAGAACTTACCGTGCTTGGAAAGGCAACAACGAATTTTGTCTTTGGGGGAGGCTTATATTTGGACCTGATGGGAAATCTATACTTTTGACTATCTTTCTTGTTGTTGCCCCTGTTGCTGTTTTCTCTGTTTTTGTGGCCAGGAAATTGTTGGATGATTTTCCTCATCACTGGGGATATTCAATATTGATCGTAGTTATTCTCCACACGGTGTTTGTTCTGATCACCCTTGTACTGACCTCAGGAAGAGACCCTGGCATAGTGCCCCGTAATTCTAATCCTCCAATTCTGGTTGAATATGAAGGGAATGCCAATATCAACAATGAACAAACCCCACAGCCACATTTGCCACGAGCAAAGGAAATAATAGTCAATGGAGTATCTGTGAAGATAAAATATTGTGATACCTGCATGCTCTATAGACCTCCTCGTTGTTCTCATTGTTCAGTATGCGATAATTGCGTGGAGCGATTTGATCATCACTGCCCTTGGGTTGGTCAGTGCATTGGATTGCGAAATTACAGGTTCTACTACATGTTTGTTTTCTCTGCAACCCTTCTTTGTTTATATGTTCATGGCTTTTGCTGGGTCTACATTAAGAGGATCATGGACTCAGAGGAGATATCAATTTGGAAAGCAATGATCAAAACTCCTGCTTCCATTGCACTAATAATATACTCCTTCATTTCTGTCTGGTTTGTTGGTGGCCTCACTGTTTTCCACACATATCTAATCAGCAAAAACCAGTCAACATATGAAAATTTTAGATACCGTTATGACCAACAAGCCAACCCTTATGACAAAGGAGTAGCTGCGAACTTCAGAGAAATATTTTGCTCCAGCATTCCTCCATCCAAGAACAACTTCAGGTCTAAGATTCTGATTCCAAAGGAACCATCAGAATCATCTAGAAGAAGAACTGTTGAATCCCTGAGCCCTATGATGAGAAAAACAGCAGGAGACCTTGAACTAGGAACCACCCCAGGGTACAATGAATTTGAGGAAGAGGAGGAGGAAAGTGATTATGCAGATGAGTTTACCAATGATGAGGAACATGGAAAGGTTAGTGGAATAGGTGATGATATGTCTGTGGATTTGACCAGGATGCTTCACACAGAAGGGGGGCAGAGAGAAGTTGCTTCACTTCTAAGGCACTCGCTGTGGGAAAGAAGCAGCAAAGAAAATGGGACATAA 1260 0.4302 MFAVQPPAPANSEGGAAGDAPLVRTYRAWKGNNEFCLWGRLIFGPDGKSILLTIFLVVAPVAVFSVFVARKLLDDFPHHWGYSILIVVILHTVFVLITLVLTSGRDPGIVPRNSNPPILVEYEGNANINNEQTPQPHLPRAKEIIVNGVSVKIKYCDTCMLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGLRNYRFYYMFVFSATLLCLYVHGFCWVYIKRIMDSEEISIWKAMIKTPASIALIIYSFISVWFVGGLTVFHTYLISKNQSTYENFRYRYDQQANPYDKGVAANFREIFCSSIPPSKNNFRSKILIPKEPSESSRRRTVESLSPMMRKTAGDLELGTTPGYNEFEEEEEESDYADEFTNDEEHGKVSGIGDDMSVDLTRMLHTEGGQREVASLLRHSLWERSSKENGT* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1407 419 PANTHER S-ACYLTRANSFERASE 17 417 - -
Gso6g1407 419 ProSiteProfiles DHHC domain profile. 154 204 - -
Gso6g1407 419 Pfam DHHC palmitoyltransferase 153 278 IPR001594 GO:0016409
Gso6g1407 419 MobiDBLite consensus disorder prediction 356 382 - -
Gso6g1407 419 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 17 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1407 Gso-Chr6 13959340 13965182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1407 83 302 Lipid Metabolism Gene Families AT4G22750 27.917 1.89e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1407 - - gmx:100791866 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1407 6 13959340 13965182 Gso6g1407 6 13959340 13965182 ECH