Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso6g1400 | ATGGCAGAGCTCCCGGCGCCGGAGGCGCAGCTCAACGGCGGAGCCCCAGCAACGACGGCGAATTCCTCGGAGCCCATCGGATCGAAGCGGCAACGGCGGCCGAGTGTCCGATTGGGCGACATCGGCGACCAGCCCTACGACTCCCACCCCCGCCGCGCCGCCGCGAAAACGTGGCGCCTCGCCTTCGACCACCCCCGCCACTCCTCCTCCGCCGCCGCCGCCGCCAGGCCCTCCAAGATCCGCCCCCTCACGAACCTCACCCCTGCCGCCGCCGTCGCCGAGTTAGGCGAAACCCTAGAGAGCGACGGCAACGTGGATAGCGTTCTAATCGGAAGCTGGAAGGTGAAGGACTCCAAGAAGCGCGGCGGCGGCGCTAAGCGTATCAGATCGAATTGGATTTCGCGAATCGACGGCGGCGAAGACGACGATGACGACATCATCGTCGACGAAGACGGTTACCACCACCGAGACTTCTCCGCCGAACACTCCGAAAGCCCCATGAGGGAGGAGCATAGCCCTATCATGGAGAATTTGGGCGTGGACGAAGAACGAGAGGTGCAGCATTACCACGAAAGAAATGGTAATTCTGGAAGCGGAGACGGTGTTAGGGTTTGGCTCAATGGATTAGGGTTAGGTCGTTACGCTCCCGTTTTCGAAATTCACGAGGTTGATGACGAGGTTTTGCCCTTGTTAACGTTAGAGGATCTTAAGGATATGGGGATTAGTGCTGTTGGGTCGAGGAGGAAAATGTTTTGTGCGATTCAGAAGCTTGGGAAAGGGTTCTCCTGA | 789 | 0.597 | MAELPAPEAQLNGGAPATTANSSEPIGSKRQRRPSVRLGDIGDQPYDSHPRRAAAKTWRLAFDHPRHSSSAAAAARPSKIRPLTNLTPAAAVAELGETLESDGNVDSVLIGSWKVKDSKKRGGGAKRIRSNWISRIDGGEDDDDDIIVDEDGYHHRDFSAEHSESPMREEHSPIMENLGVDEEREVQHYHERNGNSGSGDGVRVWLNGLGLGRYAPVFEIHEVDDEVLPLLTLEDLKDMGISAVGSRRKMFCAIQKLGKGFS* | 263 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso6g1400 | 262 | MobiDBLite | consensus disorder prediction | 14 | 29 | - | - | |
| Gso6g1400 | 262 | PANTHER | SCP160 | 184 | 262 | - | - | |
| Gso6g1400 | 262 | PANTHER | SCP160 | 8 | 184 | - | - | |
| Gso6g1400 | 262 | ProSiteProfiles | SAM domain profile. | 197 | 260 | IPR001660 | GO:0005515 | |
| Gso6g1400 | 262 | PANTHER | PROTEIN BICAUDAL C HOMOLOG 1-A-LIKE | 8 | 184 | - | - | |
| Gso6g1400 | 262 | PANTHER | PROTEIN BICAUDAL C HOMOLOG 1-A-LIKE | 184 | 262 | - | - | |
| Gso6g1400 | 262 | SMART | SAM_4 | 194 | 260 | IPR001660 | GO:0005515 | |
| Gso6g1400 | 262 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
| Gso6g1400 | 262 | Pfam | SAM domain (Sterile alpha motif) | 204 | 257 | IPR001660 | GO:0005515 | |
| Gso6g1400 | 262 | Gene3D | - | 198 | 257 | IPR013761 | - | |
| Gso6g1400 | 262 | SUPERFAMILY | SAM/Pointed domain | 200 | 257 | IPR013761 | - | |
| Gso6g1400 | 262 | MobiDBLite | consensus disorder prediction | 44 | 63 | - | - | |
| Gso6g1400 | 262 | CDD | SAM_superfamily | 202 | 256 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso6g1400 | Gso-Chr6 | 13878501 | 13879849 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso6g1400 | - | - | gmx:102661364 | 510.76 |
Event-related genes