Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1398 ATGGATCGGAGGAGAAACGCGAGTCCGGTGTACGCGCGGCAGTGGAGCGGCGGTTCCAGCAGCACCGGTTCTTCGTCGCCGGCGATGTCGCCGGCTCATCCTCAGTCACGCCTCGGCCCTACTTCCGCCACCGGTCTCTCCACCGTCAAGCGCACGCAAAACGTGGCCGCCAAAGCCGCCGCGCAGCGACTTGCTCGCGTCATGGCGTCTCAGACCACCACCGCCGATGACGGCGAGGACGACGACGATCTCGATTTCCGGTTCAGCGCTCCGCCTCCTGCCTCTCTTTCTTCCTTCTCCAGCAACTCCGGCAGTAACCGGAGTGCCAGCGCTAATGCCACCGCCATTCCTCCGATTTCGGTCGCCAGGCCTAACAGATCTCCTTCTCCTGCGTTAGGTCGGAACTTTGTAGAGCATACTCATTCGGTTCGTTCAACATCAGCCGGAAGACCGGCAGTTTCAGTTCGCTCGGCGGCAGTGGTGGCTCCGAACAAATCCACACTCCGAACGCCTATGGCTATACCTCCTATTGACCCTCCTACCAATCGGAATAGAGACAAAAGGTTTACATCAGATATATCCATCAGACCACTTAACTCAAAAGACACAGGAGATCAGCGTGAAGCTTCTGCACTCCGTGATGAACTCGATATGCTACAAGAAGAGAATGAGGTTTTATTAGAAAAGCTAAGACAAGCAGAGGAAAAACGCCAAGAAGTGGAGGCCAGAACAAGGGAACTTGAGAAACAGGTTGCTTCTCTTGGAGAAGGTGTATCCCTCGAAGCTAAACTGCTGAGCAGGAAGGAAGCTGCTCTGCGTCAAAGAGAGGCTGCTCTCAAGGCTGCTCAACAAACACAGAGTGGGAGAGATGAGGATATTGCAGCCCTTCGAGTGGAAATTCAGAACCTAAAAGATGACGCTACAGCAGCTTTGGAACAACAGCAAGAAGCTGAAGCTGAAGCAAAGGCCCTTCGCACAATGACACAGAGAATGATTTTGACCCAAGAAGAAATGGAGGAAGTTGTCCTGAAGAGATGTTGGCTTGCCCGCTACTGGGGTCTTGCTGTAAAACATGGCATATGTGCAGATATAGCACAATCCAAGCATGAACATTGGTCTTCTCTAGCTCCTCTTCCTTTTGAACTTGTCATCTCTGCTGGACAGAAGGCTAAGGAGGAATCTTGGAACAAAAGTGCTGATGGTCCAGATAGAAGCAAACTTGTTCGTGATTTGAATGATCTTGCTGGGGAAGGAAATATTGAGAGTATGCTCTCAGTTGAGATGGGTTTGAGGGAACTTGCCAACTTAAAGGTTGAGGATGCTGTTGTGCTCGCATTAGCCCAACACAGACGACCAAATTCAGTTCGGCAGTCTGTTTTAGATTCCAAATCACATGGTGATGCCAAATATTCAGAAGCATTTGAATTAAGTGAAGAGGAAGCAGAAGATGTTCTTTTCAAAGAGGCATGGTTAACTTATTTCTGGAGAAGAGCTTTATTTCATTGCGTGGAAGAAGATATTGCAGAAGAGCGTCTTCAGTTTTGGATTGCCCGCAGTGGGCAGTCACCAAGTTCACATGATGCTGTTGATGTTGAGCGAGGCTTGTTGGAGTTGAGGAAGCTGAGTATAGAACAACAACTTTGGGAAGCATCACGGAAGGGAATTGATCAGCTTCAAGGGTCAGCAAATGCTAATCATAAGCATGCCACTGACTCTGATGCCTCATCCTGA 1731 0.498 MDRRRNASPVYARQWSGGSSSTGSSSPAMSPAHPQSRLGPTSATGLSTVKRTQNVAAKAAAQRLARVMASQTTTADDGEDDDDLDFRFSAPPPASLSSFSSNSGSNRSASANATAIPPISVARPNRSPSPALGRNFVEHTHSVRSTSAGRPAVSVRSAAVVAPNKSTLRTPMAIPPIDPPTNRNRDKRFTSDISIRPLNSKDTGDQREASALRDELDMLQEENEVLLEKLRQAEEKRQEVEARTRELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKAAQQTQSGRDEDIAALRVEIQNLKDDATAALEQQQEAEAEAKALRTMTQRMILTQEEMEEVVLKRCWLARYWGLAVKHGICADIAQSKHEHWSSLAPLPFELVISAGQKAKEESWNKSADGPDRSKLVRDLNDLAGEGNIESMLSVEMGLRELANLKVEDAVVLALAQHRRPNSVRQSVLDSKSHGDAKYSEAFELSEEEAEDVLFKEAWLTYFWRRALFHCVEEDIAEERLQFWIARSGQSPSSHDAVDVERGLLELRKLSIEQQLWEASRKGIDQLQGSANANHKHATDSDASS* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1398 576 Coils Coil 293 327 - -
Gso6g1398 576 MobiDBLite consensus disorder prediction 164 207 - -
Gso6g1398 576 MobiDBLite consensus disorder prediction 12 55 - -
Gso6g1398 576 Coils Coil 265 285 - -
Gso6g1398 576 Coils Coil 209 250 - -
Gso6g1398 576 MobiDBLite consensus disorder prediction 93 115 - -
Gso6g1398 576 MobiDBLite consensus disorder prediction 68 134 - -
Gso6g1398 576 PANTHER FAS-BINDING FACTOR-LIKE PROTEIN 1 557 IPR040321 GO:0000911
Gso6g1398 576 MobiDBLite consensus disorder prediction 1 55 - -
Gso6g1398 576 PANTHER MYOSIN 1 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1398 Gso-Chr6 13803216 13812657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1398 1 552 EF-hand Containing Proteins AT5G13260 56.786 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1398 - - gmx:100805810 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1398 6 13803216 13812657 Gso6g1398 6 13803216 13812657 ECH