Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1390 ATGGAAAACGCGGACGCGAACAGCGAAGTCGAAAACGACGCGGAAATGAAGCTCTTGAGAGATAAATTCAGGCTCTCCGCAATCTCCATAATCGAATCTCAAGCAAAACAAAATGGCATGGAAGTAGCAAAAATCGTAGTCACTTGCATTGCGGATTTGGCCTTCAAATATACAGAGTGCGTGGCTAGGGATCTTCATCTATTTGCGCAGCATGCGAATCGTAAATCTGTAAATATGGAAGATGTGATACTTTGTGGACATAGGAATGAACATGTATCTGGCATGTTGAGGAGCTTCTCCAATGTTTTAAAAGCCAACGATCCTCAATCTGAAAGGAAGCGAAAGAAAGAAACCAAAAAGAACGACAAAGGAACCGCTTAG 381 0.4252 MENADANSEVENDAEMKLLRDKFRLSAISIIESQAKQNGMEVAKIVVTCIADLAFKYTECVARDLHLFAQHANRKSVNMEDVILCGHRNEHVSGMLRSFSNVLKANDPQSERKRKKETKKNDKGTA* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1390 126 MobiDBLite consensus disorder prediction 107 126 - -
Gso6g1390 126 PANTHER CENTROMERE PROTEIN S 3 125 - -
Gso6g1390 126 Pfam CENP-S protein 19 91 IPR029003 GO:0071821
Gso6g1390 126 MobiDBLite consensus disorder prediction 103 126 - -
Gso6g1390 126 SUPERFAMILY Histone-fold 33 90 IPR009072 GO:0046982
Gso6g1390 126 PANTHER CORTISTATIN 3 125 - -
Gso6g1390 126 Gene3D Histone, subunit A 3 108 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1390 Gso-Chr6 13680346 13684277 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1390 K11511 - gmx:100801568 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1390 6 13680346 13684277 Gso6g1390 6 13680346 13684277 ECH
Gso4g1696 4 46971322 46978353 Gso6g1390 6 13680346 13684277 GST