Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1370 ATGGAAACCCCCGAAAACGCCGCATACTGTTCGTCGTGGCTGCCGCCGGAAGACGAAAACGACAGCGGCGCCAAATTGGCAAAATCGGTGAACAAACTCAACGACCTCGCCGTTGCGATACAAGCCTTCAATAACAGGTACGAAGAATTGCAGAAACACCTCGAATTCATCGAACAAGCCATTGACACGAGGACCAAGGAGCTCCGAGCACTAGGCTACAATTCTACTCAAGGAACCGCCGAAAACGGCGTCGTTCAATCAGATTCAAATCCGAAGCCAGAAGAAGCCAAGGCGGTAGAGAAAGAGAAAGAAAAGGTAAAAGAAGAAGAAAAAGAAAAAGAAGACGAGCTTATTACGCTTTGCAAAACGATGAATAGCCGAGGCCTGCGTAAATACGTGTTAACGCGTCTATCCGAAACGGCGTCGCTTCGGGAACAGGTACCCGTTGCGCTGAGGAGCGCGGCGAAGCCCTCAAGGCTGGTGTTTGAATGCATTGGGAGGTTTTTCCTTCAGGGGAGCAAAGCTTACACGAAGAACTCGCCGATGGTTCCCGCAAGGCAGGTTTCGGTGCTGGTTTTGGAGCACTACTTGCTCTCTGGCTGCGTTGGGAATGAGAAGGACGTGGAGGCTTCGTTGAAGAGGGAGGCGGATTCCGCCGCGGTTGCGTGGAGGAAGAGGATGTTTGTTGAAGGGGGTTTGCTGAAGGCAGCTGAGGTTGATGCCAGGGGTTTGATTCTCTTCGTCGCCGGCTTCGGGATTCCCAGTGTTTTCAAGGATGAGGATATATACAACTTGGTTTGTGTCAGCAATGGCAGAGAATTCTCCGATGCCCTGCTCCAGTCTCAGCCCCTGCTTAAGAGGGTTTCAGATGTTGCAGATGGGATGATGAAAAAGGGCATGGCCGTTAAAGCTGTTGATTTGGCTTATACCTTTGGGTTTGAAGAGAAATATTCTCCTCAGACAGCTCTGACTTCATTTCTGCAGAAGTCTGAAGAAACTTGGAAGAAAGCCAAACAAGACGCACGTGATTTTCCTAGTGCACTGAAGGTAGCACATGAAAAATATTTGGCTGCTTTGCAATCTGTAGTTAAATGTTTGGAAGGTCACAAGATTGACCCTGTAAAATTTCTGCCTGGGTGGCAACTTAAGAATAAGATTACCAACTTGGAGAAAGATATTAGTGATACCAATAAAAAAATTGATGAGAAGTCAATGCTCAAGAGAAAAGTGGATAAAAACAATTCATCTAACAAGATGAAGATTCCAGAGGCTAAACGAGCAAGGTTCACCGGGAAAGATGCATCTGTGCTATCACCTTCACTTGCTACCTTGCAAGAGCAAAGGATTTTTAGTCGCATGGATGGCAATAGCTCATATGATGGTTCATTGTCGGCACATTTGCTGGATGGTAGATCCTATGGCAATTACCCGAATAATTATCTCACTGCAGCATCTGCTTCGGATTCTTTGGCTGAAAAATATCTTGGAAGTGCAGTGGCAAGTGGGGCTAATATGCTTGGAGGAGCTATGGGTGGTTCATTTTCTGGGTATCAGGGGGATATGTATAGATATCATGGAATTGGGGAAGGGGCATTGTCTCATGATAGGTCAGTTGGACAGAGTTTTGTGGGACAATCTGCATCAACATTGAATAATTTGTATGGGAAAACATCCACAGAAGGTTTTGCAGGTGTGCCAGAGCACCTCTCTGTTGGTGCTTCTAGTCGCAGTGGAGGTTCTGATTTATATGGCTTTGCTGATGCTGTTTTTGATATGTAG 1779 0.4654 METPENAAYCSSWLPPEDENDSGAKLAKSVNKLNDLAVAIQAFNNRYEELQKHLEFIEQAIDTRTKELRALGYNSTQGTAENGVVQSDSNPKPEEAKAVEKEKEKVKEEEKEKEDELITLCKTMNSRGLRKYVLTRLSETASLREQVPVALRSAAKPSRLVFECIGRFFLQGSKAYTKNSPMVPARQVSVLVLEHYLLSGCVGNEKDVEASLKREADSAAVAWRKRMFVEGGLLKAAEVDARGLILFVAGFGIPSVFKDEDIYNLVCVSNGREFSDALLQSQPLLKRVSDVADGMMKKGMAVKAVDLAYTFGFEEKYSPQTALTSFLQKSEETWKKAKQDARDFPSALKVAHEKYLAALQSVVKCLEGHKIDPVKFLPGWQLKNKITNLEKDISDTNKKIDEKSMLKRKVDKNNSSNKMKIPEAKRARFTGKDASVLSPSLATLQEQRIFSRMDGNSSYDGSLSAHLLDGRSYGNYPNNYLTAASASDSLAEKYLGSAVASGANMLGGAMGGSFSGYQGDMYRYHGIGEGALSHDRSVGQSFVGQSASTLNNLYGKTSTEGFAGVPEHLSVGASSRSGGSDLYGFADAVFDM* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1370 592 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 22 588 - -
Gso6g1370 592 MobiDBLite consensus disorder prediction 74 89 - -
Gso6g1370 592 Coils Coil 92 119 - -
Gso6g1370 592 Coils Coil 33 67 - -
Gso6g1370 592 PANTHER INACTIVE PROTEIN FRIGIDA 22 588 - -
Gso6g1370 592 Pfam Frigida-like protein 110 400 IPR012474 -
Gso6g1370 592 MobiDBLite consensus disorder prediction 1 23 - -
Gso6g1370 592 MobiDBLite consensus disorder prediction 93 109 - -
Gso6g1370 592 MobiDBLite consensus disorder prediction 74 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1370 Gso-Chr6 13453972 13458045 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1370 - - gmx:100784969 1119.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1721 4 47211325 47215040 Gso6g1370 6 13453972 13458045 GST