Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1347 ATGAATTCCTTTTGTGGCTCCCAACACTGCACCAAAACCAGCCCAGCCCGAATCCCCCGCAAACCCGCTTCCTCCACCACCACCTCCGACGACGACGACAAAAACCACTACCAGATGGCACCATCCTCCATGCCTCCCGCGTTCCGCTTCCGCTCCTTCTCCAGCTGCGCACACAACCGTCTTTCCCTAGCGTCCTCCTCCTCATCCGCCGTGAGGCGATCTGCCTCCGCAAGGTTCACACGACAGCACACCACCACACGCAACGAGGTCATGCTGAACAACATTGTTGGGAACGGAGTGTCTGGAATCCTGTACAAGTGGGTGAACTATGGGCGCGGCTGGCGCCCCCGTTGGTTCATCCTCCATGATGGCGTTTTGTCATACTACAAGATCCACGGCCCTGATAAGCTCGTCCTCAACCGCGAGGTTGAGACTGGGGCCATGGTCATCGGCGAGGAGTCGCTCCGTCGCATCAACAGCCACCGCCATTGCCCCTCTCGCAACCGTAAGCCTGTCAGCGAAATCCATCTCATGGTGTGTTCGGTGAGGGAGAACAGCTCAGATGAGAGGAGGTTTTCAGTGAGTACGGGGACGAAGAAGAGGCTGCATTTGAGGGCGGAGAGCAGGGAAGATAGAGCCTCCTGGGTGGAGGCAATGAGTGCCGTCAAGGACTTGTTTCCTCGCTTGCCCAAATCAGAAGCTATGTCACCCTTTTCCTCGCCGCTAGTTTCCACACAGAGGTTGAGAGATCGCCTTTTAATGGAGGGTGTGCGTGAAACTGCTATTAGGGAAGTTGAGGAAATCGTCAAGTTCGAGTTCTCCCAGTTGCAGAAGCATATTGTGGCTCTTAAGCAGAAACAGTCGCTACTTATGGACACGCTGCGCCATTTAGAGGCAGAGAAGGTTGACTTGGAGAACACACTTATTGATGACCAAAGGCAATCGAAGGATGAAACAGAATCCTATCTATCAACGCAAGAAAAGTATAGTGGTACCGTAAGTACTGGTGATGATTCTTTCGAAGAGCACGATGGGGACGATCACTCAGACGATGGAGACGATGCATTCTATGATACATGTGATGATATTCTATCAACAACAAGCTCTGAGCACCTGAGATCCTGCCATGATTCTGAATATGAGGAGACAAGTCCAAATGGTGATGAAAAATCAGCCATTGGATCTTTTGGGTTTAACTATCCTCAAATCAAGCGACGAAAGAAGTTTCCTGATCCTGTTGAGAAAGAGAGCAGCGTCAGTCTATGGTCAATCATAAAAGATAACGTTGGGAAGGATCTTACCAAAGTTTGTCTTCCAGTTTACTTCAATGAGCCTCTCTCCTCACTGCAGAAATGTTTTGAAGATCTTGAGTACTCTTTTCTTCTAGACCAAGCATATGAATGGGGTAAAATGGGTGACAGTCTAAAGAGGATGTTGCATGTGGCTGCATTTGCAGTTTCGGGGTATGCTAGTACCAATGGTAGAAGTTGCAAACCTTTTAATCCACTGTTGGGTGAGACATATGAAGCAGAGTATCAAGACAAAGGCATTCGCTTTATCTCTGAGAAGGTCAGTCATCACCCCATGATTGTTGCATGCCATTGTGAGGGAAGTGGCTGGAAATTTTGGGGTGACAGCAATTTAAAAAGTAAATTTTGGGGTCGTTCAATCCAGCTTGATCCTGTTGGTTTATTGACCGTAGAATTTGATGATGGAGAAGTCTTTCATTGGAGCAAGGTAACAACATCCATTTACAACCTCATTTTAGGAAAACTCTACTGTGACCATTATGGTACAATGCGTGTAGAGGGGAACCGTGAGTATTCATGTAAGATCAAATTCAAGGAGCAGTCGATCATTGATAGAAACCCTCACCAGATTCACGGCATAGTGGAAGATAAGAAAGGTAGAACAGTGGCAACTATATTTGGGAAGTGGGATGAAAGCTTGCATTTCATAATTGGAGGGAATTCTGGGAAAGGAAAACGGTCCTCCAATGTTTCCTCAAAACCACATCTTTTGTGGAAGCGGAATCCAACACCAGAGTACCAGACAAGATATAACCTCACACAATTTGCTATTACACTAAATGAAATCACACCTGGATTAAAGGAGAAGTTGCCACCGACAGATTCAAGGCTAAGACCTGATCAAAGGTGTTTGGAGAATGGACAGCATGAAATGGCCAATTCTGAAAAGTTGCGGCTAGAACAAAGACAGCGACAGGCACAAAAGATGCAAGAGAAGGGTTGGAAACCAAGGTGGTTTGCCAAGGAAAAAGGCAACAACTCTTACCGTTATGTTGGAGGGTACTGGGAGACCAGGGAAAAGGGGAACTGGGAATCTTGTCCTGACATTTTTGGCCAATTCTCAACCGATACTGATTTTAACTCAACTCCATAA 2403 0.4711 MNSFCGSQHCTKTSPARIPRKPASSTTTSDDDDKNHYQMAPSSMPPAFRFRSFSSCAHNRLSLASSSSSAVRRSASARFTRQHTTTRNEVMLNNIVGNGVSGILYKWVNYGRGWRPRWFILHDGVLSYYKIHGPDKLVLNREVETGAMVIGEESLRRINSHRHCPSRNRKPVSEIHLMVCSVRENSSDERRFSVSTGTKKRLHLRAESREDRASWVEAMSAVKDLFPRLPKSEAMSPFSSPLVSTQRLRDRLLMEGVRETAIREVEEIVKFEFSQLQKHIVALKQKQSLLMDTLRHLEAEKVDLENTLIDDQRQSKDETESYLSTQEKYSGTVSTGDDSFEEHDGDDHSDDGDDAFYDTCDDILSTTSSEHLRSCHDSEYEETSPNGDEKSAIGSFGFNYPQIKRRKKFPDPVEKESSVSLWSIIKDNVGKDLTKVCLPVYFNEPLSSLQKCFEDLEYSFLLDQAYEWGKMGDSLKRMLHVAAFAVSGYASTNGRSCKPFNPLLGETYEAEYQDKGIRFISEKVSHHPMIVACHCEGSGWKFWGDSNLKSKFWGRSIQLDPVGLLTVEFDDGEVFHWSKVTTSIYNLILGKLYCDHYGTMRVEGNREYSCKIKFKEQSIIDRNPHQIHGIVEDKKGRTVATIFGKWDESLHFIIGGNSGKGKRSSNVSSKPHLLWKRNPTPEYQTRYNLTQFAITLNEITPGLKEKLPPTDSRLRPDQRCLENGQHEMANSEKLRLEQRQRQAQKMQEKGWKPRWFAKEKGNNSYRYVGGYWETREKGNWESCPDIFGQFSTDTDFNSTP* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1347 800 MobiDBLite consensus disorder prediction 1 40 - -
Gso6g1347 800 Gene3D - 506 681 - -
Gso6g1347 800 MobiDBLite consensus disorder prediction 1 25 - -
Gso6g1347 800 Coils Coil 729 749 - -
Gso6g1347 800 SUPERFAMILY PH domain-like 101 240 - -
Gso6g1347 800 Pfam Oxysterol-binding protein 420 776 IPR000648 GO:0008289
Gso6g1347 800 Gene3D - 98 225 IPR011993 -
Gso6g1347 800 SUPERFAMILY Oxysterol-binding protein-like 415 789 IPR037239 -
Gso6g1347 800 Coils Coil 294 314 - -
Gso6g1347 800 SMART PH_update 98 226 IPR001849 -
Gso6g1347 800 Pfam Pleckstrin homology domain 105 220 - -
Gso6g1347 800 ProSiteProfiles PH domain profile. 97 224 IPR001849 -
Gso6g1347 800 MobiDBLite consensus disorder prediction 310 352 - -
Gso6g1347 800 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 2 792 - -
Gso6g1347 800 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 792 IPR000648 GO:0008289
Gso6g1347 800 Gene3D - 718 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1347 Gso-Chr6 13233667 13243440 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1347 K20456 - gmx:100781218 1576.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1737 4 47454274 47462888 Gso6g1347 6 13233667 13243440 GST