Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1343 ATGGCAGGGGCTTCGAATTCCAAGATTGAGTTCTTGGTGTGGCTGTCGCAAGTGATTGGAGGTCTCTGCTCGCGCTCCGCCGAGGATGACCGAGTTTTTGTCAACGCAGATTCTGCTGCTCAGAATAAGCCTGGCAGCAACCACGACGCCATTATTTTCACCGCCGCGCCTCAGAGGATGGAGAGGAATCTTCCAGAACCTTCTAGAACCAACGGGAAGGCTTCTACCACTGCGGCGGAAGAGTTCTACGACGGAATCCCGCGCTTCCCCGAGGACTCCTTGCCGAACAAGCCTAAGTCAAAGGTCTCCGAGGTGAGTTTTCGCTTGGGCAAAGCTGGTACTACTGGAATTGCTATTGGATTAGAGAAAGCAGTAGAGGTTTTGGACACCCTTGGGAGCAGCATGACAAATTTAAATGCAAGCAGTGGGTTTGTTTCTGGAGCTGCAATAAAGGGGAATGAAATTTCTATCTTAGCATTTGAGGTTGCAAACACAATTGTCAAAGGTTTTAATCTTCTGCAATCTCTTTCCGCAAAAAGCATTAGGCATTTAAAAGAAGAGGTGCTTCTTTCACATGCCGTGCAAGATTTAGTATCAAAGGATATGGATGAACTTCTTAGAATTGTTGCAGCAGACAAGAGGCAGGAGTTGAATGTTTTTTCTGATGAGGTGATTCGTTTTGGAAATCGTTCAAAGAATCCTCAGTGGCACAACCTAGACCGTTACTTTGAGAAGGTTAGCAAAGAATTAAATGGTCAAAGATTGTCAAGAGACGAGGCAGAATCAATAATGCAACAATTGATGACTTTAGTTCAGTTTACAGCTGAATTGTACCATGAATTACATGCTTTGGATAGATTTGAACAAGATATTCAGCGCAAGGGTGAGGAGGAGGAGGATCAAAGAGGTGATGGCCTTGCATTCTTGAGGGCAGAAATTAAAAGTCAAAAGAAGCAAATTAGACAGTTAAAGAAAAAATCACTCTGGTCTAGAAGTTTGGAGGAGGTTATGGAGAAGCTTGTAGACATTGTCCATTTTTTGCATTTGGAGATAAGCAATGCCTTTGGCAATGCAGATGACCACAAACCATTCATTGGACACATGAGCAATCGCCAAAGATTGGGCCCTGCAGGCCTTGCTTTGCATTATGCAAATATAGTGCTTCAAATTGATACTCTTGTGGCTAGATCCTCTATACCTGCAAATACAAAGGATGCATTATATCAAAGCTTGCCTCCTAATATAAAATTAGCTCTGCGCTCCAAATTACCATCCCTTCGTGTTGTAGAAGAGCTAACTATAGCAGATATCACAGATGAGATGGAGAAAACATTACATTGGTTGTCCCCCATGGCCACTAACACATCCAAAGCACATCATGGCTTTGGTTGGGTAGGGGAGTGGGCAAACACAGGCTCTGAGGTAAGGAAGACCGGTGTAATGCAGATTGAGACATTCCACCATGCAGACAAAGACAAAGTGGAATATTATATTCTTGAACTTCTCTTATGGCTTCATCGCTTGGCTATCAGAAGTAAGGCTGTCAGTGATGCTGGCAAAGTAAGGCCTGCCATCAAGTCTCCTGTTGGCACTGCTTTGCAAAATACAAATGAGCAAATATCATTGTTAACAATTGACGAGCAAAACATGCTGCTGGATTTAAATAAGAAAATACCAATTAGACGGATCAGTAAAAGCTTGGATTTTGACAGTTTGAATATCAGATTCAGGGAGAACTGCAGATTGGCCAAGAGTAGAAGTCATTCATCAAGTAGAAGCAAGGAGATATCTTTTAATAGGATTTTCTCTAAGCTTCCAGTCATTGATTTTGATATTGACAAAGAAAGAGCATTGAACGTGATTGACAGACTGGATGTGGTCAGATAA 1887 0.4255 MAGASNSKIEFLVWLSQVIGGLCSRSAEDDRVFVNADSAAQNKPGSNHDAIIFTAAPQRMERNLPEPSRTNGKASTTAAEEFYDGIPRFPEDSLPNKPKSKVSEVSFRLGKAGTTGIAIGLEKAVEVLDTLGSSMTNLNASSGFVSGAAIKGNEISILAFEVANTIVKGFNLLQSLSAKSIRHLKEEVLLSHAVQDLVSKDMDELLRIVAADKRQELNVFSDEVIRFGNRSKNPQWHNLDRYFEKVSKELNGQRLSRDEAESIMQQLMTLVQFTAELYHELHALDRFEQDIQRKGEEEEDQRGDGLAFLRAEIKSQKKQIRQLKKKSLWSRSLEEVMEKLVDIVHFLHLEISNAFGNADDHKPFIGHMSNRQRLGPAGLALHYANIVLQIDTLVARSSIPANTKDALYQSLPPNIKLALRSKLPSLRVVEELTIADITDEMEKTLHWLSPMATNTSKAHHGFGWVGEWANTGSEVRKTGVMQIETFHHADKDKVEYYILELLLWLHRLAIRSKAVSDAGKVRPAIKSPVGTALQNTNEQISLLTIDEQNMLLDLNKKIPIRRISKSLDFDSLNIRFRENCRLAKSRSHSSSRSKEISFNRIFSKLPVIDFDIDKERALNVIDRLDVVR* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1343 628 Pfam Domain of unknown function (DUF3475) 157 213 IPR021864 GO:0045927
Gso6g1343 628 PANTHER OS01G0873900 PROTEIN 10 628 IPR045021 GO:0045927
Gso6g1343 628 Pfam Protein of unknown function (DUF668) 373 456 IPR007700 GO:0045927
Gso6g1343 628 PANTHER DUF668 FAMILY PROTEIN 10 628 - -
Gso6g1343 628 Coils Coil 306 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1343 Gso-Chr6 13181758 13190677 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1343 - - gmx:100779607 1219.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1740 4 47493826 47502881 Gso6g1343 6 13181758 13190677 GST