Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1301 ATGGCTTTGGGGAAATATGCTAGGGTAGATGGTAGAAGATCGTCGAGCTGGTGTTCGACGGTGACTGTTGTCGTGTTTGTGGCTCTATGCTTGGTTGGGGTTTGGATGATGACATCATCTTCAGTTGTCCCTGTGCGTAATGGAGATGAGGCCCAGGAGAATAAGAACCAAGTGAAAGAACAAACAGAGCCTACAGAGGTGAAAGAAGCAGTGAGTGAGGTCAGCAATAGCAATATGCGGCAGTTTGAAGATAATCCAGGTGATTTGCCTGAGGATGCAACCAAAGGGGACAGCAATGTAGCCTCTGAAGACAACTCAAACTTGTCAGATAAACAAGAAGAGAAGTCGGAGGAAAATCCTGTAGAGAGGTCTTCTGACGATACAAAGTCGGAAGACGTGGAGGATAAGAAAACTGAGGAGGAAGGTTCTAATACAGAAAATGAATCAAACTCAGACTCTACAGAAAATAGCAAAGACAGTGATGAGACTTCCACTAAAGAATCTGATTCTGATGAGAATGAGAAGAAGTCTGATTCAGATGAAAGTGAAAAGCAATCTAATGACACTGATGAAACAACAGATACTAAGATAGAGGAGAAGGTGGAAGAAAGTGATAACAAGGAATCTGATGAAAACTCTAGTGAGAAGAATATAAATGATGATACCAAACAGAAGAGTTCAAAGGAGGTATACCCTTCTGGGGCTCAGTCTGAGCTTCAAGAAGAAAGTACAGCAGAAACTGGGTCTTGGTCAACTCAGGCAGCACAGTCGAAGAATGAAAAGGATTCTCAAGAGTCCTCCAAGCAGCCAACTGGATACAAGTGGAAGCTTTGTAATGTCACTGCTGGTCCTGATTTTATACCATGCCTTGATAACTGGAAAGCTATTAGGAGTCTCCAGAGTACTAAACACTATGAACATCGAGAAAGGCACTGTCCTGAAGAACCTCCTACCTGCCTTGTTCCTGTTCCTGAAGGTTATAAACGCCCAATTGAGTGGCCTAAGAGCAGAGAGAAGATATGGTATTACAATGTTCCACACACCAAGCTTGCTGAAGTTAAGGGCCACCAGAATTGGGTGAAAGTAACGGGCGAGTACCTTACTTTTCCTGGTGGTGGAACCCAATTCAAACATGGGGCACTTCATTACATTGACTTTATACAAGAGACTGTACCTGACATTGCTTGGGGAAAACGCACACGTGTTATACTAGATGTTGGATGTGGTGTTGCCAGCTTTGGAGGTTTTCTCTTTGATAGAGATGTACTTGCAATGTCGTTAGCACCAAAGGATGAACATGAAGCTCAGGTACAATTTGCACTTGAAAGGGGGATTCCTGCTATATCTGCTGTGATGGGCACAAAGAGGCTTCCCTTCCCTGGGAAAGTATTTGATGTAGTCCATTGTGCACGATGTAGAGTTCCGTGGCATATAGAAGGTGGTAAACTTCTTTTGGAGCTAAATAGAGTATTGAGACCTGGAGGTTTTTTTGTATGGTCTGCTACTCCAATTTATCAGAAGCTTCCTGAAGATGTTGAAATATGGAAGGCCATGAAGGCACTAACAAAAGCCATGTGCTGGGAAGTTGTGTCGATCAGCAAGGATCCAGTAAATGGAGTAGGTGTAGCTGTATACAGGAAGCCAACTTCTAATGAGTGTTACGAGCAACGCTCAAAGAATGAGCCACCGCTGTGTCCAGACTCTGATGATCCTAATGCAGCATGGAACATTCAATTGCAAGCTTGCTTGCACAAAGCGCCAGTTAGTTCAAAGGAACGAGGCTCAAAATTGCCTGAGCTGTGGCCAGCCAGACTGATCAAAGTGCCTTATTGGTTGTCGAGTTCCCAAGTTGGAGTTTATGGAAAGCCAGCCCCTCAAGATTTCACTGCTGATTATGAACACTGGAAACGTGTAGTATCCAAGTCTTATCTAGACGGGATGGGAATTAAATGGTCAAATGTACGCAATGTCATGGATATGAGATCTATCTATGGAGGATTTGCTGCAGCTTTGAGAGATTTGAATGTTTGGGTCATGAATGTGGTTACAATAGACTCCCCAGATACTCTTCCTATTATTTATGAACGAGGTCTTTTTGGTATATATCATGATTGGTGTGAATCATTTAGCACCTATCCTAGGACCTATGATCTCCTCCATGCTGATCATTTGTTTTCAAAGCTTAAGAAAAGGTGCAATTTGGCTGCTGTAGTGGCTGAGGCTGATCGGATTCTTAGGCCTGAAGGAAAACTTATTGTTCGCGATACTGTTGAGATCATTGAAGAGCTTGAGAGCATGGCTAGGTCTATGCAGTGGAAGGTTCGCATGACTTACTCCAAGGATAAGGAGGGTTTGTTATGTGTGGAGAAGTCCAAGTGGCGACCTAAGGAGCAGGAAAAGCTCGAGTATGCTATTGCTTAA 2421 0.4345 MALGKYARVDGRRSSSWCSTVTVVVFVALCLVGVWMMTSSSVVPVRNGDEAQENKNQVKEQTEPTEVKEAVSEVSNSNMRQFEDNPGDLPEDATKGDSNVASEDNSNLSDKQEEKSEENPVERSSDDTKSEDVEDKKTEEEGSNTENESNSDSTENSKDSDETSTKESDSDENEKKSDSDESEKQSNDTDETTDTKIEEKVEESDNKESDENSSEKNINDDTKQKSSKEVYPSGAQSELQEESTAETGSWSTQAAQSKNEKDSQESSKQPTGYKWKLCNVTAGPDFIPCLDNWKAIRSLQSTKHYEHRERHCPEEPPTCLVPVPEGYKRPIEWPKSREKIWYYNVPHTKLAEVKGHQNWVKVTGEYLTFPGGGTQFKHGALHYIDFIQETVPDIAWGKRTRVILDVGCGVASFGGFLFDRDVLAMSLAPKDEHEAQVQFALERGIPAISAVMGTKRLPFPGKVFDVVHCARCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPIYQKLPEDVEIWKAMKALTKAMCWEVVSISKDPVNGVGVAVYRKPTSNECYEQRSKNEPPLCPDSDDPNAAWNIQLQACLHKAPVSSKERGSKLPELWPARLIKVPYWLSSSQVGVYGKPAPQDFTADYEHWKRVVSKSYLDGMGIKWSNVRNVMDMRSIYGGFAAALRDLNVWVMNVVTIDSPDTLPIIYERGLFGIYHDWCESFSTYPRTYDLLHADHLFSKLKKRCNLAAVVAEADRILRPEGKLIVRDTVEIIEELESMARSMQWKVRMTYSKDKEGLLCVEKSKWRPKEQEKLEYAIA* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1301 806 MobiDBLite consensus disorder prediction 152 227 - -
Gso6g1301 806 CDD AdoMet_MTases 403 498 - -
Gso6g1301 806 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 188 802 IPR004159 GO:0008168
Gso6g1301 806 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 69 IPR004159 GO:0008168
Gso6g1301 806 PANTHER PMT26-LIKE PROTEIN, PUTATIVE-RELATED 188 802 - -
Gso6g1301 806 PANTHER PMT26-LIKE PROTEIN, PUTATIVE-RELATED 5 69 - -
Gso6g1301 806 MobiDBLite consensus disorder prediction 228 260 - -
Gso6g1301 806 MobiDBLite consensus disorder prediction 47 270 - -
Gso6g1301 806 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 650 786 IPR029063 -
Gso6g1301 806 MobiDBLite consensus disorder prediction 52 67 - -
Gso6g1301 806 MobiDBLite consensus disorder prediction 68 83 - -
Gso6g1301 806 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 285 789 IPR004159 GO:0008168
Gso6g1301 806 Gene3D Vaccinia Virus protein VP39 375 580 IPR029063 -
Gso6g1301 806 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 308 562 IPR029063 -
Gso6g1301 806 MobiDBLite consensus disorder prediction 107 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1301 Gso-Chr6 12697037 12702809 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1301 - - gmx:100816312 1497.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1776 4 47919441 47925232 Gso6g1301 6 12697037 12702809 GST