Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1284 ATGGTGAGGCTTTTAGGATTGACTCGTGGAGAGGTTGATGAACCCAGGGAAATTGCTTCCAGGTCCAATTTGACAAGTGAGTCCAGTGAAAATGGTTGGCTCATCAGATTCTTTGACTCATCATTCTTCTGTGAGTGGATTGCAGTTAGCTACTTGTACAAGCATGATCACGCTGGGGTGCGTGATTATCTCTGTAATAGAATGTACACACTTCCCTTGCAGGGGATTGAGAGTTATTTGTTCCAAGTGTGTTACTTGATGGTACACAAGCCGAGCCCGTCTTTGGATAAGTTTGTCATAGACATTTGCTCCAAGTCGCTTAAGATTGCTTTGAAGGTGAATTGGTTCTTGTTGGCAGAGCTTGAGGACTCTGATGATAATGAAGGGATTAGTAGGGTTCAGGAGAAGTGCCAGATTGCTGCCACCTTGATGGGTGAGTGGCATCCCTTGATACGGCCTCAAAGTGCACCTGCAAGCCCCGGGGGCAAGAACCTAGTTTTGAATAGGATATTGTCGTCGAAACAACGATTGTTGTCTCTAACATCTTCACCGCCTGCTCAGAGGTCTTTGTCATTCTCACCTTCTTCAGGAAACAATTTTCAGGAGGATGGTAGTCCACAATCTCCTGAGGAAAACAAGTTATTTAAGAAATTTATGCCGGGTCCAAAGGTTAGAGATGCTTTGCTTTTTAGGAAGTCAGTGGAGAAAGATGATGATGATGATTCTGAAAAGGATGGTTTTTTCAAGAGGCTTTTAAGAGATAGCAAAGGTGATGATGAGTTGGGTCAGAAGATTCGTGATCCTTTTCTCTTCCGTAAGTCATCTGAGAAATATGATGAAGATTCTGAAAAGGACAATTTCTTAAAAAGGCTCTTGAGGGATGGTGAAGAATCTGAAAAGGATGGTTTCTTTAGAAGGTTCTTGAGAGACTGTAAAGCTGAGGATGAGGATTTGGCCTCAAGTTCAGAGGGATTCTTTAAGAGATTGTTTCGTGATAGAAAGAATGATTCTGATGATAAAACAAACAGTAAGACAATGGAGGATGAAGAAAAAGAGGGTTTTTTCCGAAAGTTTTTCAGAGAGAAGTTGGAGGATAAGAAGGATGGGAATGATGAAGGAGATATAGTAAATTCAGAAGAGAAATGTGCAAAGCCTGCTGAAGAGGATGAAAAAGAAGGGTTTTTCCGGAAATTCTTTAAGGATAAATTTGACAAGAAAGAAGCAAATGATAAAATTGATGATGGTACAACCAATGTTGAGGAAGAAGAGCCTTCTGATTTTTCTTTGTTCAAAAGAATTTTTCGTGTTCACCCTGAAGATGGTAAAAGTAGTTCAGCCAATGAAAACAACGGTGGGTTGTTTGAAAGTAGTCCAGGTACAGAGAATTTTTTCCGCAAATTGTTTAGAGACCGTGACCGATCAATTGAAGATTCAGAGCTATTGGGGTCACAAAAGCAGAAAGAGCAACGAAATGAGAAATCAGGTACAAAGCCCCCACTTCCAATTAATCCATCACAGTTCCGGAAAGGAGCTTACCATGAGTCATTGGATTTTGTGCTGACATTATGCGATACATCATTTGGGCTAGTGGATGTATTTCCAGTTGAAGATCGCAAACATGCCCTGCATGAGTCGCTTGCAGAGATCAATTTACATTTAACAGAGTCTCAGAGTACTGGAGGAGTTTGTTTTCCGTTGGGAAAGGGCATGTACCGTGTGCTTCATATACCTGAAGATGAAGCTGTTCTCTTGAATTCTAGGGAGAAGGCGCCTTACCTGATTTGTGTTGAAGTTTTGAGATGTGAAATGCCAAGCCATTCCAAGGAGACATCTAGTTTTCAGAAACTTTCAAAAGGTGGAATTCCTTTGGCAAATGGAGATGCTTTCTTGCAAAAACCACCCCCCTGGGCATATCCCTTATGGACAGCACAAGAAGCATATCGCAATAGCAATGATAGAATGTCCAGATCAACTGCCGAGGCTATTGACCAGGCAATGACCCATGCGGCTGACACAAAAGTCAAATTTGTTAGTGTAAATCTTTCTGTGGAAGCACAATTACATGATTGGCCAGAGAGGACTGAAGCAGATCTATGTGGTGGATATCGGCATCCTGCTTCAACTTACAGAGATGGTATACAAGAAGTGGCAAGGTCAGGACATGACAGTGATATGGAGTGGGTGCAGGTAGTGTTGAAAGCTGATCCTGGGGTTAGAATGGAAGATATCGAGGATCAAGCACCAAGACGGCGGAAGGAACATCGTCGTGTTCCAAGTACAGTGGCAATAGAGGAAGTAAAGGCTGCGGCAGCAAAGGGAGAAGCACCCCTTGGACTCCCTTTGAAAGGTGCTGGTCAAGATTCATCAGATGCACCACCAAGGGCTAATGGAATTATCCCCAAAGCTAGTGATGCCTTGTCTGGTGAACTTTTTGAGGTAAAGAAAGAGAGGATACGTAAGGCTTCTATCCATGGGAATTTACCTGGTTGGGACTTGCGATCTGTTATAGTAAAGAGTGGGGATGATTGTAGGCAGGAGCATCTGGCAGTTCAACTTATTTCACACTTCTACGATATTTTCCAAGAAGCTGGCCTACCTCTCTGGCTGCGCCCATATGAAGTATTATGTACTTCTTCTTACACTGCTCTTATTGAAACAATTCCTGATACGGCTTCTCTACATTCTATCAAGAGTCGATATCCCAACATCTCAAGTTTACGTGAATTTTTCATTGCCAAATACCAAGAAAATTCTCCAAGTTTTAAACTTGCCCAGAGGAACTTTGTTGAAAGTATGGCCGGATATTCCCTGGTTTGCTACCTCCTGCAGGTGAAGGATAGGCATAATGGGAACCTCTTAATGGATGAAGAAGGCCATATTATACATATTGATTTTGGCTTCATGCTTTCTAATTCACCCGGTGGTGTTAATTTTGAAAGTGCACCTTTCAAATTAACCCGAGAACTTCTTGAGGTCATGGATTCTGATGCTGAGGGCATTCCGAGCGAGTTCTTTGATTATTTCAAGGTTTTATGCATTCAAGGCTTCCTTACTTGCCGTAAGCATGCTGAGAGTATTATTCTTCTTGTTGAGATGTTGCAGGACTCTGGTTTCCCCTGTTTCAAAGGTGGTCCACGGACAATACAGAACCTACGAAAGCGTTTCCATCTCAATTTAACTGAAGAGCAATGTGTATCTTTGGTGCTTTCCCTCATTAGCAGTAGCCTGGATGCATGGCGGACACGGCAGTATGATTATTACCAGAGGGTTTTGAACGGGATATTGTGA 3288 0.424 MVRLLGLTRGEVDEPREIASRSNLTSESSENGWLIRFFDSSFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLQGIESYLFQVCYLMVHKPSPSLDKFVIDICSKSLKIALKVNWFLLAELEDSDDNEGISRVQEKCQIAATLMGEWHPLIRPQSAPASPGGKNLVLNRILSSKQRLLSLTSSPPAQRSLSFSPSSGNNFQEDGSPQSPEENKLFKKFMPGPKVRDALLFRKSVEKDDDDDSEKDGFFKRLLRDSKGDDELGQKIRDPFLFRKSSEKYDEDSEKDNFLKRLLRDGEESEKDGFFRRFLRDCKAEDEDLASSSEGFFKRLFRDRKNDSDDKTNSKTMEDEEKEGFFRKFFREKLEDKKDGNDEGDIVNSEEKCAKPAEEDEKEGFFRKFFKDKFDKKEANDKIDDGTTNVEEEEPSDFSLFKRIFRVHPEDGKSSSANENNGGLFESSPGTENFFRKLFRDRDRSIEDSELLGSQKQKEQRNEKSGTKPPLPINPSQFRKGAYHESLDFVLTLCDTSFGLVDVFPVEDRKHALHESLAEINLHLTESQSTGGVCFPLGKGMYRVLHIPEDEAVLLNSREKAPYLICVEVLRCEMPSHSKETSSFQKLSKGGIPLANGDAFLQKPPPWAYPLWTAQEAYRNSNDRMSRSTAEAIDQAMTHAADTKVKFVSVNLSVEAQLHDWPERTEADLCGGYRHPASTYRDGIQEVARSGHDSDMEWVQVVLKADPGVRMEDIEDQAPRRRKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSDAPPRANGIIPKASDALSGELFEVKKERIRKASIHGNLPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRYPNISSLREFFIAKYQENSPSFKLAQRNFVESMAGYSLVCYLLQVKDRHNGNLLMDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGIPSEFFDYFKVLCIQGFLTCRKHAESIILLVEMLQDSGFPCFKGGPRTIQNLRKRFHLNLTEEQCVSLVLSLISSSLDAWRTRQYDYYQRVLNGIL* 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1284 1095 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 812 1080 IPR000403 -
Gso6g1284 1095 SUPERFAMILY ARM repeat 54 125 IPR016024 -
Gso6g1284 1095 Gene3D - 892 1093 IPR036940 GO:0016301
Gso6g1284 1095 MobiDBLite consensus disorder prediction 443 457 - -
Gso6g1284 1095 SUPERFAMILY Protein kinase-like (PK-like) 552 1088 IPR011009 -
Gso6g1284 1095 MobiDBLite consensus disorder prediction 439 458 - -
Gso6g1284 1095 PANTHER PHOSPHATIDYLINOSITOL KINASE 300 1095 IPR015433 GO:0046854|GO:0048015
Gso6g1284 1095 PANTHER PHOSPHATIDYLINOSITOL KINASE 4 259 IPR015433 GO:0046854|GO:0048015
Gso6g1284 1095 PANTHER PHOSPHATIDYLINOSITOL KINASE 263 330 IPR015433 GO:0046854|GO:0048015
Gso6g1284 1095 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 837 851 IPR018936 GO:0016301
Gso6g1284 1095 Gene3D - 717 887 - -
Gso6g1284 1095 MobiDBLite consensus disorder prediction 366 390 - -
Gso6g1284 1095 Pfam Phosphatidylinositol 3- and 4-kinase 834 1041 IPR000403 -
Gso6g1284 1095 MobiDBLite consensus disorder prediction 183 214 - -
Gso6g1284 1095 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Gso6g1284 1095 MobiDBLite consensus disorder prediction 477 506 - -
Gso6g1284 1095 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 931 951 IPR018936 GO:0016301
Gso6g1284 1095 MobiDBLite consensus disorder prediction 477 494 - -
Gso6g1284 1095 SMART pi3k_hr1_6 834 1093 IPR000403 -
Gso6g1284 1095 CDD PI4Kc_III_beta 803 1095 - -
Gso6g1284 1095 MobiDBLite consensus disorder prediction 183 208 - -
Gso6g1284 1095 PANTHER BNAA02G34040D PROTEIN 300 1095 - -
Gso6g1284 1095 PANTHER BNAA02G34040D PROTEIN 263 330 - -
Gso6g1284 1095 PANTHER BNAA02G34040D PROTEIN 4 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1284 Gso-Chr6 12531508 12551139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1284 1 1094 Lipid Metabolism Gene Families AT5G09350 68.838 0.0 1506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1284 K19801 - gmx:100811499 2125.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1791 4 48119791 48132235 Gso6g1284 6 12531508 12551139 GST
Gso5g1626 5 39585164 39600338 Gso6g1284 6 12531508 12551139 PCT
Gso6g1284 6 12531508 12551139 Gso5g1626 5 39585164 39600338 PCT