Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1269 ATGCCGCCGGCGAAGAGGGGAAAAGCAAAGGCGGAGTCTAAGGTAACAACGCCGTCGGAAAAACCTAATGATTTTCCGTCTTGTATTCAGAGCGTGCCTCCTTCCTCCGTCGCTATAACCATCCACGCCAAACCTGGTGCCAAATCCGCATCTATAACTGATATAAGCGACGAAGCGGTGGGAGTGCAAATTGACGCACCTGCGAGGGATGGCGAAGCAAATGCGGCTCTTCTCGATTACATCAGTTCTGTTTTGGGTGTGAAACGAAGACAAGTCTCCTTAGGCACTGGTTCTAAGTCACGAGATAAGACGGTGATCGTGGAAGATGTAACTCAGCAATATGTTTTTGACGCTTTGGATAAAGTCTCGAAGCAGCATTGA 381 0.4882 MPPAKRGKAKAESKVTTPSEKPNDFPSCIQSVPPSSVAITIHAKPGAKSASITDISDEAVGVQIDAPARDGEANAALLDYISSVLGVKRRQVSLGTGSKSRDKTVIVEDVTQQYVFDALDKVSKQH* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1269 126 Hamap UPF0235 protein YggU [yggU]. 33 121 IPR003746 -
Gso6g1269 126 Gene3D - 27 126 IPR036591 -
Gso6g1269 126 SUPERFAMILY YggU-like 27 115 IPR036591 -
Gso6g1269 126 SMART DUF167_2 33 109 IPR003746 -
Gso6g1269 126 Pfam Uncharacterised ACR, YggU family COG1872 37 108 IPR003746 -
Gso6g1269 126 PANTHER OS04G0686300 PROTEIN 1 125 - -
Gso6g1269 126 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1269 Gso-Chr6 12368174 12375514 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1269 K09131 - gmx:100499954 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1805 4 48293429 48294302 Gso6g1269 6 12368174 12375514 GST