Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1224 ATGGAACACAAAGGTTACACTTTAGATGACACAGTGGATCTTAGTGGACGGCCTGTGCTTTCTTCTACAACTGGGAAACGGAAAGCTTGCATTTTCATTCTTGCTTATCAAGCATTTGAAAGATTTGCCTACTTTGGGGTAAGTGCGAATTTGGTGATTTATATGACATCGGAGCTCCACAAAGACTTGGTATCAGCAGTAACCAGTGTGAATAACTGGTCAGGCACAGCATGGATAACTCCAATAGTTGGTGCTTATATAGCAGATTCTCACTTGGGCCGCTTTTGGACAATCACTTTTGCGTTGCTCATATATGCCATGGGAATGGGGCTCCTGGTTCTTACTACATCACTGAAGTGCTTCAGACCAACGTGTACAGATGGAATTTGTAAAGAAGCATCAACCGTACAATTAACATTATACTATTTATCAATATACACCATAGCCATTGGCAGTGGCGTGCTGAAGCCCAACATGTCAACTTTTGGTGCTGACCAATTCGATGACTTCAGACCCAAAGAAAAAGTGCTAAAAGTTTCATACTTCAACTGGTGGTCGTTTAACACTGCATTTGGCACTTTAGCCGCTACACTGTTTGTTGTGTACATTCAAGAGAGGTTTGGGTGGGGATTGGGGTATGGAATATCAGCGGTTGGTTTTCTAGTTGCCTCTGTTACCTTCTTTATGGGTGTTCCAATATATAGGCATAAATCCAGAAAGGGGAAGAGCCATGCAAAGGAGTTTTTCAGTGTCCCTGTTGTTGCTTTCAGAAATAGGAAGCTTCAACTTCCTAGTAGCCCTTCTGAACTGCATGAGTGTGAGATGCAACATTACATTGATAGGGGAAGACGACAAATTTATCACACTCCTCGTTTCAGGTTCTTAGACAAGGCTGCTATAAAACAAGAGAAAACAGATGCCTCAAATCCCCCATGCACAGTGACTCAAGTAGAGAGAAACAAGCTTGTTCTAGGGATGCTTGGAATATGGCTACTAATTATAATCCCAAGCAACTTCTGGGCAGTGGAAGTAACCGCGTTTGTCAAGCAAGGCACAACAATGGAAAGGAACCTGGGCCCCAACTTCCAAATACCAGCAGCCTCCCTGTGGAGTTTTGTGGTGGTCACCATTCTCATTTGTGTCCCCATTTACGAATGTTACTTCGTACCGTTCATGCGTCGAAGAACCGGCCTTCACAGAGGAATCAAAATGCTTCACAGGATTGCCATAGGAGTTGCCATCCAAATCATGGCAGCTGCAGTCATGTTTGCTGTGGAAATTCGAAGAATGAAAGTCATAAGGGAGAAACACATAACTGGTGCAAAAGAAGTAGTTCCAATGAGCATATTCTGGTTGTTGCCTCAACATGTTCTACTTGGTCTTGCAAACACATTCCTTATGGCTGGATTGCTAGAATTCTTCTATGATCAATCACCAGAAGAAATGAAAGTACTTGGCACAGCCTTTTACACAAGCACCATAGCTGTTGGGAAATACTCCAACAGTTTACTAGTGTTTATGATAGATAAATTTTCAAGGAAGATGAGTGGTAAGAGCTGGATTGGTAACAATCTTAATGATTGTCACCTTGATTACTATTATGCTCTTCTTTTTGTGATATCTGCGTTTAATTTTGCGGTCTTTCTGTGGGTACAAAGGGGATACATTTACAAGAAGGAAAATACAACAGAGGTGAATGAGTTTGAGATTGTGAGAGCAGAAAAGACAGAATCACAGGTAGGAAAAGCTTGA 1752 0.4195 MEHKGYTLDDTVDLSGRPVLSSTTGKRKACIFILAYQAFERFAYFGVSANLVIYMTSELHKDLVSAVTSVNNWSGTAWITPIVGAYIADSHLGRFWTITFALLIYAMGMGLLVLTTSLKCFRPTCTDGICKEASTVQLTLYYLSIYTIAIGSGVLKPNMSTFGADQFDDFRPKEKVLKVSYFNWWSFNTAFGTLAATLFVVYIQERFGWGLGYGISAVGFLVASVTFFMGVPIYRHKSRKGKSHAKEFFSVPVVAFRNRKLQLPSSPSELHECEMQHYIDRGRRQIYHTPRFRFLDKAAIKQEKTDASNPPCTVTQVERNKLVLGMLGIWLLIIIPSNFWAVEVTAFVKQGTTMERNLGPNFQIPAASLWSFVVVTILICVPIYECYFVPFMRRRTGLHRGIKMLHRIAIGVAIQIMAAAVMFAVEIRRMKVIREKHITGAKEVVPMSIFWLLPQHVLLGLANTFLMAGLLEFFYDQSPEEMKVLGTAFYTSTIAVGKYSNSLLVFMIDKFSRKMSGKSWIGNNLNDCHLDYYYALLFVISAFNFAVFLWVQRGYIYKKENTTEVNEFEIVRAEKTESQVGKA* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1224 583 PANTHER PROTEIN NRT1/ PTR FAMILY 5.1 11 567 - -
Gso6g1224 583 SUPERFAMILY MFS general substrate transporter 22 553 IPR036259 -
Gso6g1224 583 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 567 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso6g1224 583 CDD MFS_NPF5 28 557 IPR044739 GO:0042937|GO:0042938|GO:0071916
Gso6g1224 583 Pfam POT family 95 521 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gso6g1224 583 Gene3D MFS general substrate transporter like domains 2 565 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1224 Gso-Chr6 11906123 11915996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1224 4 564 Organic Solute Cotransporters AT2G40460 57.576 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1224 - - gmx:100789214 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1846 4 48731552 48735880 Gso6g1224 6 11906123 11915996 GST