Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1217 ATGGATAGTAAACGAGAAAATTTGTTATTATCCTCATTACCTAGACAACTGTTATCAATTGATGAAGAATTATGGCGGATGACCGAAGAGAGGATACAAGAGATACTATGGACAATTCAACCAAATGTATTATCTGAGATGAATAGAAAGAATGTTCTTAATTATGTTCAAAAGCTGATTGGAGATTACTATGATACAAAGGTTTTTCCATTCGGTTCTTTTCCACTAAAAACTTATCTTCCTGATGGAGATATCGACTTGACGGTTATTAATCATGAAGACGAAGAGGAGAATTTGGCAAAAGAAATATGCACTATACTTGAATGTGCAAATGACCTTATATACCAAGTAAAAGACATAGAACATATACGTGCACAGGTTCAGGTTGTGAAATGCACAGTGAAAAATATACCAATTGACATTACTTTCAATCAGATGACTGGACTTTGTACTCTATGCTTTTTGGAGCAGGTTGACCAACTTGCTGGAAAGAACCATATTTTCAAACGCAGTATTATCTTAATCAAGGCATGGTGTTGCTACGATAGTCGACTTCTTGGTTCACAGCATGGCTTGTTATCAACATACGCAACAGAAGTATTAGTCTTATATATTATCAATCGTTTTCATGCATCAGTGCGTGATCCTTTAGAGGTTCTATACATATTTTTTGACTACTACGGCACATTTGATTGGGAGCATAATTATATGAGTATATGGGGTCCAAAAGCCTTATCATCCCTTCCTGAAATTGTTGATAGACCAGAATGTGATCAGGATGAATTCTTGCTCCATAAAGAGTTTCTCATAAACTACAGGGATATTTTCTCTTCCAAAGCAAAGTCATCCGAGACTACGACCAATACATTTCCCGTTAAGCACATAAACATCTTGGATCCTCTAAGAAATGATAACAACCTTGGTCGCAGTGTCAACGAAGCCAGTTTTCATCGAATAAGATTTGCTCTTTCCTACGGTGCTAAAAAGTTTAAGCAGATCTTCACGCTCGCAGGAGAAAACATGGGTGAGGCACTGGAGAAGTTTTTCTTCGACACTTTGCAAAGGAATGGGAAAGGAGAAAGGGCAGATGTAGATGTTCCTGTTTCTCCATTTGGTACTGGAAGATATGAAAAGTCTGTCCTCGATGGAGATTGTGATAGTTACTATGGTGGCTCACAATATGCTCAACAATATCCTAATTATGCCATGCCAACAACAACTATACATTCCAATTCTCCATCATCACCTTCTCAGGACGATATCCTTGCACTATCTACACAACAAAATTGGAGTGAAGGTGATCTCCTTGCATTATCAACACAACAAAACTGGAGTATGTATTATCAAAGCGTTTACAATGGATATATCCCAGGACAAACACTTTTTCATCCAACTTACAACTTTGAAGAAGGAGGAAGATCACGAGGAACAGGCACATATATACCTGACTTGAATTATAATTGCTACTGGGATATACGTGCAAAGGTGAACAGGCCAAGGAGATTTCCTTCTGCAAAGCACAATGCATTGCTCAAATCATGTCCCAAAAGGAAAGAAGCGGAGGAGGTTCATTTTGAGACAAACATGAATGATAATTCAAAACCGTTTGAGCTTTCAAATGAAGACTTCCCCCTTATTCTAGGCATTCGCAAGGCTACATCGCCAACACAAGCACAGGAGTCAGCTCCATTTGCAAATGTTCATTCTGAGACAAACAAGGATGGTGGTAACTCAAGGTTCTATGAGCCCTCAAATGAAACACATGCCAAAGAGCCTGCTCTGCTGGCAAAGGTTCTTTCTAAGACAGACAAGCATAGTAATCCGTGGTCGTTTGAGCTTGTAAAGGAAGATTTTCCTCTTCTTCCAAAGGTTTGTTCTGAGCCACGCATGGATGATAATTCAAAGTCTTTTGATCTCTCAAAGAAAGATTTTCCCCCTCTTCAACGCAGTCACAAGATTGTTCCATCAAAGTCTAATCAGCCAACTAAGTATGAGAAAATTTCATCATCCTCTAAAGAGTCTAAATTGAAAAATGTTGAGTTTGGAACTCATAAGCTTTCACAATCACTGGCAGAACAAAGTATGTCAACAAAGGGTGAGAAAGAAATTTCTGGTGTTTCATCATCCCAGGAAACTAAGCTGGTAGTTCCAAAGGTGGCATTGTAG 2166 0.3855 MDSKRENLLLSSLPRQLLSIDEELWRMTEERIQEILWTIQPNVLSEMNRKNVLNYVQKLIGDYYDTKVFPFGSFPLKTYLPDGDIDLTVINHEDEEENLAKEICTILECANDLIYQVKDIEHIRAQVQVVKCTVKNIPIDITFNQMTGLCTLCFLEQVDQLAGKNHIFKRSIILIKAWCCYDSRLLGSQHGLLSTYATEVLVLYIINRFHASVRDPLEVLYIFFDYYGTFDWEHNYMSIWGPKALSSLPEIVDRPECDQDEFLLHKEFLINYRDIFSSKAKSSETTTNTFPVKHINILDPLRNDNNLGRSVNEASFHRIRFALSYGAKKFKQIFTLAGENMGEALEKFFFDTLQRNGKGERADVDVPVSPFGTGRYEKSVLDGDCDSYYGGSQYAQQYPNYAMPTTTIHSNSPSSPSQDDILALSTQQNWSEGDLLALSTQQNWSMYYQSVYNGYIPGQTLFHPTYNFEEGGRSRGTGTYIPDLNYNCYWDIRAKVNRPRRFPSAKHNALLKSCPKRKEAEEVHFETNMNDNSKPFELSNEDFPLILGIRKATSPTQAQESAPFANVHSETNKDGGNSRFYEPSNETHAKEPALLAKVLSKTDKHSNPWSFELVKEDFPLLPKVCSEPRMDDNSKSFDLSKKDFPPLQRSHKIVPSKSNQPTKYEKISSSSKESKLKNVEFGTHKLSQSLAEQSMSTKGEKEISGVSSSQETKLVVPKVAL* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1217 721 Pfam Nucleotidyltransferase domain 51 133 IPR002934 GO:0016779
Gso6g1217 721 MobiDBLite consensus disorder prediction 629 710 - -
Gso6g1217 721 Gene3D Beta Polymerase, domain 2 26 163 IPR043519 -
Gso6g1217 721 MobiDBLite consensus disorder prediction 556 587 - -
Gso6g1217 721 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 709 - -
Gso6g1217 721 MobiDBLite consensus disorder prediction 681 710 - -
Gso6g1217 721 MobiDBLite consensus disorder prediction 629 648 - -
Gso6g1217 721 SUPERFAMILY PAP/OAS1 substrate-binding domain 167 334 - -
Gso6g1217 721 SUPERFAMILY Nucleotidyltransferase 22 178 IPR043519 -
Gso6g1217 721 Gene3D - 206 335 - -
Gso6g1217 721 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 1 709 - -
Gso6g1217 721 CDD NT_PAP_TUTase 48 151 - -
Gso6g1217 721 MobiDBLite consensus disorder prediction 556 583 - -
Gso6g1217 721 MobiDBLite consensus disorder prediction 652 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1217 Gso-Chr6 11827920 11833247 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1217 - - gmx:100788864 1454.11