Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1216 ATGTTATTTACTCTCTCTAATGCTGTTCAAACCCTTTCGTCACCCTGCACTTATTTTCCACATAACTCCTCTTCTAAATTTAAGTGTGTTAGTTCTAAAGTTCCCGTCTTTGCGCAGAAACCCCGCGAGAGCAGTTACTACATTGAAAGGGGTTTGGAGTTTTGCGCCGGTGACGCGTTTTTCCGGCAAGAGAGCGCAACCGGCAGAGACCTCGGCGTTTTGGCAGCTTCTCTGCACAAGAAAGAGAATGGGAGGTTGCGTGTTCTCGACGCGTTGTGTGGGTGCGGAATTCGGTCGCTACGGTACTTGGCGGAGGCCGAGGCGGATTTTGTGGCGGCGAATGATGGGAACGAGGACTATGGAAGCACCATTGTGGAGAATTTGATGCGGGTTTCGGCGGAAGAGGAAGGGAGATGGGTGGTTACTCATTTGGAAGCTAATAGGGTTATGATGGATTATTATTTGCAGAAGAGTTTCTTTGATTTTATTGATGTTGATTCTTTTGGGAGTGATTCCTCTTTCTTGAGGTCTGCCATTTGTACTTTGAAATTGGGTGGCTTGCTCTATGTTACTTCCACTGATGGCTTCTCATCTGGTGGCCACCGTCCTCATCATTCTTTAGCTGCATATGGAGCTTATGTGCGCCCTATGCCGTATTCGAATGAGATTGGTTTGCGAATGCTCATAGGTGGGGTTGCCAGGGAGGCTGCATTGTTGGGGTATCATATCACTCCCTTGTTTTCATACTATGCTTTTCATGGACCTGTTTTTCGAGTCTTGCTCAGATTGAATCGTGGGAAGATTCATGACAGTAGGCATTATGGTTATATTGGCTACTGCCACCAGTGTGGAAATTCCCATGAATTTTCTTGGGATCGACTTGGCCAGATCAGTTGCTCCTGCAGTACGCCTAAGGTTTCAAACTCCCTTGTGGTCTCAGGACCTCTTTGGACAGGACCTCTTCATGATGCTGCATATCTTACGAACATGTTAAATCTGGCCAAGCAGTGGAAATGGATAGTTGATGACGGTAAAGACAGCCTCGAAAAGCTTATAAAACTGATGGTGGATGAAAGTGACCCCAAGTTGCCATTTGGGTATATCAAGTTGGATGAGATGGCAAGCCGTGCAAAAATCAATTCTCCACCTTTGAAGGCCTTGATGAGCGCCATGCACCAGAAGGGTTATGCTGCCAGCAGGTCTCACATAGAAACAAATGCAATTAAGACAAATTGCCCCATGACAGAATGCATTAAGATTGCCAAAGAACTATTGCAGTTGCAGGTTTCTGCCGCTTAA 1299 0.4627 MLFTLSNAVQTLSSPCTYFPHNSSSKFKCVSSKVPVFAQKPRESSYYIERGLEFCAGDAFFRQESATGRDLGVLAASLHKKENGRLRVLDALCGCGIRSLRYLAEAEADFVAANDGNEDYGSTIVENLMRVSAEEEGRWVVTHLEANRVMMDYYLQKSFFDFIDVDSFGSDSSFLRSAICTLKLGGLLYVTSTDGFSSGGHRPHHSLAAYGAYVRPMPYSNEIGLRMLIGGVAREAALLGYHITPLFSYYAFHGPVFRVLLRLNRGKIHDSRHYGYIGYCHQCGNSHEFSWDRLGQISCSCSTPKVSNSLVVSGPLWTGPLHDAAYLTNMLNLAKQWKWIVDDGKDSLEKLIKLMVDESDPKLPFGYIKLDEMASRAKINSPPLKALMSAMHQKGYAASRSHIETNAIKTNCPMTECIKIAKELLQLQVSAA* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1216 432 ProSiteProfiles Trm1 methyltransferase domain profile. 45 421 IPR002905 GO:0003723|GO:0004809|GO:0008033
Gso6g1216 432 PANTHER N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE 4 426 IPR002905 GO:0003723|GO:0004809|GO:0008033
Gso6g1216 432 CDD AdoMet_MTases 87 191 - -
Gso6g1216 432 Pfam N2,N2-dimethylguanosine tRNA methyltransferase 60 420 IPR002905 GO:0003723|GO:0004809|GO:0008033
Gso6g1216 432 PANTHER TRNA (GUANINE(26)-N(2))-DIMETHYLTRANSFERASE 4 426 - -
Gso6g1216 432 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 47 422 IPR029063 -
Gso6g1216 432 Gene3D Vaccinia Virus protein VP39 32 360 IPR029063 -
Gso6g1216 432 Gene3D - 364 424 IPR042296 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1216 K00555 - gmx:100788340 876.7