Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1045 ATGTGCATAACTGCATATACTTATCTTATTGGCAAAACAACTGTTCTGCTGGCACACTTTTTACCTCAGAAGCACAAGCATCAAGGGTCTTCAATCAATCTCAAACTGGCAATAAACCAGGCTCTAACGTTTTATGATGCTCAAAAATCTGGACACTATCCAAGGAACAGTCCAGTGAAATTTAGAGGAGATTCAGGATTACAGGATGGGAATTTGGCTAAGACTGATCTTACTGGTGGATTTTATGATTCTGGCAACAACATTAAGTTTACCTTCACCACAGCTTATACTATGACCTTGTTGAGTTGGACTGTTATTGAATATCATAGTAAATATGCTGATATTGGTGAGCTTGATCATGTGAGGGACATCATCAGATGGGGTAGTGACTACCTGCTCAAGGTGTTCATTCCCCCAAGTTCAACAGCTGGATCAAACCTTACACTGTATTCCCAGGTTGGAAGTACCATTAGTAATAATAACAATGAGCAAAATGATGTGAGTTGCTGGCAACGACCTGAAGATATGACATATGAGAGACCAGTTTCAATTTGTGATGCCTCTGCTTCAGATTTAGCTGGTGAAATTGTGGCAGCATTATCTGCATCATCGATGGTATTTGAAGAAGACAAGGATTACTCAAGGAGACTTATCCAAGCAGCAGAAAGCCTCTTTGAGGCGATCACAAGTGAAGATCCTACAGAACACGGGACCTACACCATGGTTGATGCATGTGGAAAACAAGCAAGAATGCTTTATAACTCAACTAGCTACAAAGATGAGTTGGCTTGGGGAGCAACTTGGTTATTTCTTGCTACTGAAAACGCTGATTACCTTGCAACTGCAACTGAAATTTTTTTATCAGCCAAGGGTGATGAACCAAGTGTTGACAAAGGGGTTGTTTATTGGAATAACAAGCTCAATGCTGTGGAGATTTTGCTTACCGGTATTCGATTCTTCCGTGATCCTGGCTTCCCACATGAGGATGCTTTGAAACTCTCATCAAACTCTACCGATGCCCTCATGTGTTCTTATCTATTCAATAAATACTTTAGCAGGACACCTGGTGGATTGATTATCCTGAAACCAGATAATGGTCCATTACTCCAGTATGCTGCTACAGCATCCTTTCTCAGTAAATTGTACAGTGATTACCTTGATCATCTCAAAATGTCTGGTGCAAGTTGCAAGACTGATGCATTCTCGGTGGAAATGCTTCACGATTTTGCTACTTCTCAGGTTAGCTACATCTTGGGGCAAAACCCTATGAAAATGAGTTATTTGGTGGGCTATGGTGACAGGTTTCCTCTCCAGGTTCATCACAGAAGTGCATCAATCCCTTGGAATAACCAACCCTACCGTTGTGAAGATGGTAAGAAATGGCTAAACTCTAAAGATCCAAATCCACAGGTTCTTTTGGGAGCCATGGTGGGAGGACCAGACACTAATGACAATTTCGTGGATCAAAGGACCAACCAAAAGTTCACTGAGCCAAACATAGCAAGCAATGCTGGCTTAGTTGCAGCACTTATTGCACTTCAAGATCCTCCTTATAATTCACGTGACTTGAAAAACTCATTGTGGGGATGGACTTGA 1596 0.4148 MCITAYTYLIGKTTVLLAHFLPQKHKHQGSSINLKLAINQALTFYDAQKSGHYPRNSPVKFRGDSGLQDGNLAKTDLTGGFYDSGNNIKFTFTTAYTMTLLSWTVIEYHSKYADIGELDHVRDIIRWGSDYLLKVFIPPSSTAGSNLTLYSQVGSTISNNNNEQNDVSCWQRPEDMTYERPVSICDASASDLAGEIVAALSASSMVFEEDKDYSRRLIQAAESLFEAITSEDPTEHGTYTMVDACGKQARMLYNSTSYKDELAWGATWLFLATENADYLATATEIFLSAKGDEPSVDKGVVYWNNKLNAVEILLTGIRFFRDPGFPHEDALKLSSNSTDALMCSYLFNKYFSRTPGGLIILKPDNGPLLQYAATASFLSKLYSDYLDHLKMSGASCKTDAFSVEMLHDFATSQVSYILGQNPMKMSYLVGYGDRFPLQVHHRSASIPWNNQPYRCEDGKKWLNSKDPNPQVLLGAMVGGPDTNDNFVDQRTNQKFTEPNIASNAGLVAALIALQDPPYNSRDLKNSLWGWT* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1045 531 Gene3D - 29 524 IPR012341 GO:0005975
Gso6g1045 531 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 416 442 IPR018221 -
Gso6g1045 531 PANTHER ENDO-1,4-BETA-GLUCANASE 7 526 - -
Gso6g1045 531 SUPERFAMILY Six-hairpin glycosidases 35 516 IPR008928 GO:0005975
Gso6g1045 531 Pfam Glycosyl hydrolase family 9 37 510 IPR001701 GO:0004553|GO:0005975
Gso6g1045 531 PANTHER ENDOGLUCANASE 7 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1045 Gso-Chr6 10154803 10158035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1045 9 513 Glycoside Hydrolase AT5G49720 45.525 3.45e-140 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1045 K01179 - gmx:100805472 1056.97