Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1037 ATGGTGGTCTCATCCTCTGCGCGCGATTACATCAATCGCATCTTGCAGGACATCTCCGGCATGAAGATTCTCATCCTCGATTCTCAAACGGTAGGTATTGTGAGTGTCGTGTATTCACAGTCGGAGCTTCTTCAGAAAGAAGTGTTTTTGGTAGAGTTGGTAGATTCTATTTCCAAGTCAAACGAATCAATGTCACATCTCAAGGCCGTCTACTTCCTTCGACCTACATCGGAGAATATCCAGCTTTTGCGCCGCCAGCTGGCTAGTCCTAGATTTGGAGAGTATCATCTATTTTTCTCCAACATATTGAAGGACACTCAGATTCACTTACTTGCTGATTCAGATGAACAGGAAGTTGTCCAGCAAGTTCAGGAGTTCTATGCAGATTTTGTTGCAATTGATCCTTATCATTTCACTTTGCACGTGCCTTCACATTACATATATATGCTCCCAGCTGTGGTAGATCCTTCAACAGTGCAGCGCTTCTCTGACCGGGTTGTTGATGGTCTTTCAGCTCTTTTTTTGGCATTAAAGCGAAGACCAGTAATTAGGTATCAAAGGACATCTGACATTGCAAAAAGGATAGCACAGGAAGCAGCTAAATTGATGTACCAAGAGGAAAGTGGTCTTTTTGATTTTAGGCGAATGGAAGTTTCTCCACTGCTGTTAGTGATTGACAGGAGGGATGATCCTGTAACCCCATTACTAAATCAATGGACCTATCAGGCTATGGTTCATGAATTAATAGGAATCCAAGACAACAAAGTGGACTTAAAATCCGTTGGTAAATTTCCAAAGGATCAGGAGGAGATTGTGTTGTCATCAGAACAAGATTCCTTTTTCAAAGCTAACATGTATGAGAATTTTGGAGATATAGGTATGAATATCAAACGGATGGTTGATGAATTTCAGCAAGTGTCAAAAAGTAACCAGAACATCCAAACAATAGAGGACATGGCCAAATTTGTTGATAATTATCCTGAGTACAGAAAAATGCATGGAAATGTGACTAAACATGTTACTTTAGTAACTGAAATGAGCAAGATAGTTGAAGAGCGAAAACTTATGTCAGTTTCACAAACAGAACAGGAGTTGGCTTGCAATGGAGGACAAGGAGCTGCTTTTGAGGCAGTGACAAATCTACTAAACAATGAAAGCATATCAGATGTGGACCGACTACGTTTGGTCATGCTGTATGCTTTACGATATGAGAAAGATAGCCCTGTTCAATTAATGCAGCTCTTCAACAAACTGGCTTCCAGATCTGCCAAGTACAAACCTGGGCTTGTCCAGTTTCTTCTGAAGCAAGCAGGTCTTGACAAGAGAACAGGTGATCTTTTTGGAAATCGAGATCTAATGAATATTGCCCGTAACATGGCTCGTGGTTTGAAGGGTGTTGAGAATGTTTACACCCAGCATCAGCCACTTCTGTTTCAACTCATGGAAAGCATTGTCAAAGGGAGGTTGAGAGATGTGGACTACCCATTTGTTGGAAATCACTTTCAACAGGGAAGGCCGCAGGATGTGATCATCTTCATTGTTGGTGGGACAACTTATGAGGAGTCACGGTCTGTTGCTTTACAAAATGCCAGCAATACCGGTGTTCGTTTTATACTTGGTGGTTCTTCTGTTCTTAATTCTAAAAGGTTTTTGAGGGACTTGGAAGAAGCTCAAAGGGTAGCACGTTCTAGCACCACTGTTATTTGA 1707 0.4148 MVVSSSARDYINRILQDISGMKILILDSQTVGIVSVVYSQSELLQKEVFLVELVDSISKSNESMSHLKAVYFLRPTSENIQLLRRQLASPRFGEYHLFFSNILKDTQIHLLADSDEQEVVQQVQEFYADFVAIDPYHFTLHVPSHYIYMLPAVVDPSTVQRFSDRVVDGLSALFLALKRRPVIRYQRTSDIAKRIAQEAAKLMYQEESGLFDFRRMEVSPLLLVIDRRDDPVTPLLNQWTYQAMVHELIGIQDNKVDLKSVGKFPKDQEEIVLSSEQDSFFKANMYENFGDIGMNIKRMVDEFQQVSKSNQNIQTIEDMAKFVDNYPEYRKMHGNVTKHVTLVTEMSKIVEERKLMSVSQTEQELACNGGQGAAFEAVTNLLNNESISDVDRLRLVMLYALRYEKDSPVQLMQLFNKLASRSAKYKPGLVQFLLKQAGLDKRTGDLFGNRDLMNIARNMARGLKGVENVYTQHQPLLFQLMESIVKGRLRDVDYPFVGNHFQQGRPQDVIIFIVGGTTYEESRSVALQNASNTGVRFILGGSSVLNSKRFLRDLEEAQRVARSSTTVI* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1037 568 PIRSF VPS45_Sec1 1 565 IPR001619 GO:0016192
Gso6g1037 568 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 45 3 555 - -
Gso6g1037 568 SUPERFAMILY Sec1/munc18-like (SM) proteins 6 556 IPR036045 -
Gso6g1037 568 Pfam Sec1 family 22 553 IPR001619 GO:0016192
Gso6g1037 568 Gene3D - 2 128 IPR043154 -
Gso6g1037 568 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 3 555 IPR001619 GO:0016192
Gso6g1037 568 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 238 351 IPR043127 -
Gso6g1037 568 Gene3D - 138 555 IPR027482 -
Gso6g1037 568 Gene3D - 353 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1037 Gso-Chr6 10097059 10104416 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1037 K12479 - gmx:100802965 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2014 4 50490715 50498098 Gso6g1037 6 10097059 10104416 GST