Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1024 ATGGCCCTGGAGAACTGTTTGCGAGTGACCACAGTAGGCACAGCCACACCCCAATGCTTTTCTCCATTTTTTCCATCTTCAAGGGATAAACTTGTCTTCCCAACTCACAGAGGTTTCAAGAAATCCTTGCAAAACTCAACACTGTCATACCCTTATCTTTACTCCACCGGTGCTGCCTATAGAAAATCCCGTTTTGTTTGCAATGCTCGTGAAGCAGTAAATGAAGTTAAAGTGGTGACTGACTCAAGCTGGAACAACCTAGTCATTGCAAGTGAGACCCCTGTGCTGGTAGAGTTTTGGGCACCATGGTGTGGTCCATGCAGGATGATAGCACCTGCTATCGATGAGCTAGCGAAGGAATATGCTGGAAAAATTGCATGCTTTAAGCTTAACACAGATGATTCTCCAAACATAGCAACACAGTACGGCATCAGAAGCATACCAACAGTTCTGTTCTTCAAGAATGGAGAGAAAAAAGAAAGCATAATTGGTGCAGTTCCCAAATCCACTCTGTCCGCAACAGTGGAAAAATACGTTGATTCATAA 546 0.4396 MALENCLRVTTVGTATPQCFSPFFPSSRDKLVFPTHRGFKKSLQNSTLSYPYLYSTGAAYRKSRFVCNAREAVNEVKVVTDSSWNNLVIASETPVLVEFWAPWCGPCRMIAPAIDELAKEYAGKIACFKLNTDDSPNIATQYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSATVEKYVDS* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1024 181 PANTHER GEO12009P1 26 178 - -
Gso6g1024 181 ProSitePatterns Thioredoxin family active site. 96 114 IPR017937 -
Gso6g1024 181 SUPERFAMILY Thioredoxin-like 64 180 IPR036249 -
Gso6g1024 181 Gene3D Glutaredoxin 76 180 - -
Gso6g1024 181 PRINTS Thioredoxin family signature 95 103 - -
Gso6g1024 181 PRINTS Thioredoxin family signature 103 112 - -
Gso6g1024 181 PRINTS Thioredoxin family signature 143 154 - -
Gso6g1024 181 PANTHER THIOREDOXIN M-TYPE PROTEIN 26 178 - -
Gso6g1024 181 TIGRFAM thioredoxin: thioredoxin 80 178 IPR005746 GO:0015035
Gso6g1024 181 Pfam Thioredoxin 76 176 IPR013766 -
Gso6g1024 181 ProSiteProfiles Thioredoxin domain profile. 67 181 IPR013766 -
Gso6g1024 181 CDD TRX_family 88 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1024 Gso-Chr6 9972219 9974799 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1024 K03671 - gmx:100305596 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2025 4 50613044 50614948 Gso6g1024 6 9972219 9974799 GST