Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0987 ATGAAGACACGCCACTTACTTAATGATCTGTGTCTAGTAGTGCTAGTGTTAGCCCTAGGTTGTGCAGCGGAGGAGGATTCCACTTCCACCGCCAGCATCATCTTCACCACACTCGGCAGAGCCTCCTACGCCTTCGACATCTATTCCCTCCCAGTCCCAGTTCAGCAACAACAACAACAACCTCTCTCCCCAAGCCAAGAACTTCTACTCACCGATGGCCACTCCGTTAATTTCAACGGCCACTTCCTTTCCAATAGTTCCGCTATTCAACTACCCAAACACTCCCCTCCTCTCCAACTCGTTTACGTCACCGAGAGAAACGGCTACCCCACCATATTCTACGACGCCATTTATAGTTCTTCTATGGTCTCAAACAGAATCCAAATCCCTCTCTTATCCAACCACCTCAGCGACGCTTCCATCAAAGACAAGCCCAGCGTCACCCCCGATGGACAATATTTACTATACGTGTCCAGCCACGAGAACCCGGGCGTTCCACGGGCCAGTTGGACCGCGGTTTACTCCACTCAGCTCGAGTCAGGCCTCACCCAAAGACTCACCCCTTACGGTGTCGCTGATTTCAGCCCATCCCTCTCTCCCTCTGGTCTCTGGACCGCTGTCGCTTCCTACGGGCCTCACGGTTGGGCCGGTGAAGTAGAAGATCTCACCACTGACATCTACGTCTTCCTCACTCACGACGGAACTCACCGATTCAAAATCGTTGAGCACGGTGGCTGGCCCACCTGGGTCGATGATCGCACTCTTTACTTCCACCGTCGAGGCCAAGACCACTGGTGGAGTATTTACCGAGCCATTCTCCCCTCCAACGCTCCTTTTTCAGTTGACTCGGTCTTCGTCGAACGAGTCACCCCACCGGGTCTCCACGCGTTCACACCCGCCACTTCCCCCGGCAACAACAACTTCATCGCCGTCGCAACCAGAAGGCCAGGCTCCAATTTTCGTCACATCGAGCTATTCGACCTCGCTAGTAACGAATTCACTGAGCTGACTCGGTTGGTCTCGCCTAATTCTCACCACCTCAACCCGTTCATCTCGCCCGATTCAACCCGGGTCGGTTACCATAAATGCAGAGGAGAACCCAACGCTCACAGTACCCCACAGTTTTTCCTCGAGAATGTTCGGAGCCCCGTCCCCGGTCTAACTCTCTTCCGCTTCGTCGGTTCTTTCCCGGTTTTCTCCCCCTCCGGCGACCGAATCGCGTACGTCGAGATGCCCGGAGTTTATGTCGTGAACCGGGACGGTTCGAACCTGCGTAAGGTTTCCAACGCGATGGCGTTTTCAACCGCTTGGGACCGGGTTCGACCCGGTGTCATCTACACCGCAATTGGAGAAACATTTGCTCCGGAGAGCTCGCAGGTTGACATCGTGTCCATCGACGTTGACCATGAAAACAGTGTGAAGAGGTTGACCCTGGACGGAAAAAACAACGCGTTTCCGTCACCCTCGCCAGACGGTAAATGGATCGTGTTTCGGTCGGGTCGATCGGGGCATAAGAACCTTTACATAATGGACGCAGTTGATGGTGAGAAGAAGGAGCTTCGAAGATTAACGGAGGGTCCGTGGACTGATACCATGTGCAACTGGTCACCGGATGGAGAATGGATCGCTTTTGCGTCGGACCGGCATGACCCGGGTAGTGGGAGCTTCGAGATCTACCTGATCCACCCGAACGGAACCGGGTTGAGGAAACTGATTCAAAGCGGGTCGGGTGGAAGAACAAACCACCCGTATTTCAGCCCCGATGGGAAGAGCTTAACGTTCACTTCGGATTATGCGGGAATTTCGGCTGAGCCAATCTCGAACCCGCACCACTACCAGCCGTATGGTGAAATATTCACCGTTAGATTGGATGGTTCCGGGATCAAGAGGTTGACTCATAACTCGTATGAGGATGGAACACCTGCTTGGTCCCCCAAGTATATGCCGCCGGTGAATGTGCCAAAGGGAGGACCCTATTGCTCTTTTGATGATTGTCATTGGCTCAACAATATGCCCATTTCTACTGCTTTCGGTGTGTCTAAGGCTAAGCCTCAGTGTGCTGCTCTGTAA 2070 0.5362 MKTRHLLNDLCLVVLVLALGCAAEEDSTSTASIIFTTLGRASYAFDIYSLPVPVQQQQQQPLSPSQELLLTDGHSVNFNGHFLSNSSAIQLPKHSPPLQLVYVTERNGYPTIFYDAIYSSSMVSNRIQIPLLSNHLSDASIKDKPSVTPDGQYLLYVSSHENPGVPRASWTAVYSTQLESGLTQRLTPYGVADFSPSLSPSGLWTAVASYGPHGWAGEVEDLTTDIYVFLTHDGTHRFKIVEHGGWPTWVDDRTLYFHRRGQDHWWSIYRAILPSNAPFSVDSVFVERVTPPGLHAFTPATSPGNNNFIAVATRRPGSNFRHIELFDLASNEFTELTRLVSPNSHHLNPFISPDSTRVGYHKCRGEPNAHSTPQFFLENVRSPVPGLTLFRFVGSFPVFSPSGDRIAYVEMPGVYVVNRDGSNLRKVSNAMAFSTAWDRVRPGVIYTAIGETFAPESSQVDIVSIDVDHENSVKRLTLDGKNNAFPSPSPDGKWIVFRSGRSGHKNLYIMDAVDGEKKELRRLTEGPWTDTMCNWSPDGEWIAFASDRHDPGSGSFEIYLIHPNGTGLRKLIQSGSGGRTNHPYFSPDGKSLTFTSDYAGISAEPISNPHHYQPYGEIFTVRLDGSGIKRLTHNSYEDGTPAWSPKYMPPVNVPKGGPYCSFDDCHWLNNMPISTAFGVSKAKPQCAAL* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0987 689 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 30 664 - -
Gso6g0987 689 SUPERFAMILY DPP6 N-terminal domain-like 300 645 - -
Gso6g0987 689 SUPERFAMILY Tricorn protease N-terminal domain 107 353 - -
Gso6g0987 689 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 30 664 - -
Gso6g0987 689 Pfam WD40-like Beta Propeller Repeat 580 597 IPR011659 -
Gso6g0987 689 Pfam WD40-like Beta Propeller Repeat 145 166 IPR011659 -
Gso6g0987 689 Pfam WD40-like Beta Propeller Repeat 474 509 IPR011659 -
Gso6g0987 689 Pfam WD40-like Beta Propeller Repeat 521 559 IPR011659 -
Gso6g0987 689 Gene3D - 281 442 IPR011042 -
Gso6g0987 689 Gene3D - 553 647 IPR011042 -
Gso6g0987 689 Gene3D - 46 260 IPR011042 -
Gso6g0987 689 Gene3D - 444 552 IPR011042 -
Gso6g0987 689 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0987 Gso-Chr6 9518982 9521450 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0987 - - gmx:100791865 1404.81