Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0980 ATGAAGTCGTTGCATTTGAGAACCATCATCCAGTTCCCGGCGATGACGAACAAGAGAAAAAGATCCCAGAAACATACCCCACCACCTCCTCCTCCCTCAACACCCCCAACTCCACAAACCCAAGCCCGCCACTCCCTCAACACCGCAAAAGCCCGGGCCTGGGCCCCTCTCAGCCTCACCCGCCACGAACTCTCCTTACCCCTCACCTTCCCCACGGGCCAAACCTTCCTCTGGAAAAACACCGCCCCTTCACAATACACCGGAGTCGTCGGGCCCCACCTCATTTCCCTCAAGCACCTCCAAAACGGCGACGTTTCCTACTGCCTCCACTCCCCCTCCCACTCCGACACCGCCGAAACTGCCCTGCTTGACTTCCTAAATGCCACCGTTTCGCTCGCCGACTTATGGAAGACGTTTTCCGCTTCCGACGCAAGGTTCGCCGAGCTCGCGCACCACTTAAGCGGCGCCCGAGTCCTCCGGCAAGACCCTTTCGAGTGTTTGATTCAGTTTCTGTGCTCTTCTAATAACAACATCGGAAGAATCACGAAAATGGTGAATTACGTGTCCTCCCTGGGAACTCACGTGGGAGACGTTGGAGAGTTTCAGTTCCACGCTTTCCCTTCTTTGGAACAACTTTCCTCCGTCTCAGAGCAACAACTCAGAGACGCCGGTTTCGGTTACAGGGCTAAATATATAATTGGTACGATTAATGCATTGAAATCAAAACCCGGTGGAGGCGAAGAATGGCTTCGTTCTCTTCGTAAGATGGAGCTTCGAGATGTTATATCTGCACTTTGTACGTTACCCGGTGTGGGTCCTAAAGTGGCTGCTTGCATTGCTCTCTTTTCGCTTGATCAGCACCATGCTGTTCCTGTTGACACACACGTGTGGCGGATTGCCACCAAGTATCTCTTACCTGAGCTTGCAGGTTCCCAGTTGACACCCAAGCTCTGCGATCGTGTTGCAGAGGCGTTTGTAACCAAATATGGCAAATATGCTGGCTGGGCGCAGACTCTATTGTTCATAGCTGAATTACCCTCACAAAAAGCCCTCCTACCTTCACATTTGTTGACTGTTAAACAACGCAATGCTGCAAAGATAGAAGGCAGCGAAGAAGAAGTTGAGTGA 1128 0.5213 MKSLHLRTIIQFPAMTNKRKRSQKHTPPPPPPSTPPTPQTQARHSLNTAKARAWAPLSLTRHELSLPLTFPTGQTFLWKNTAPSQYTGVVGPHLISLKHLQNGDVSYCLHSPSHSDTAETALLDFLNATVSLADLWKTFSASDARFAELAHHLSGARVLRQDPFECLIQFLCSSNNNIGRITKMVNYVSSLGTHVGDVGEFQFHAFPSLEQLSSVSEQQLRDAGFGYRAKYIIGTINALKSKPGGGEEWLRSLRKMELRDVISALCTLPGVGPKVAACIALFSLDQHHAVPVDTHVWRIATKYLLPELAGSQLTPKLCDRVAEAFVTKYGKYAGWAQTLLFIAELPSQKALLPSHLLTVKQRNAAKIEGSEEEVE* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0980 375 Gene3D - 40 126 - -
Gso6g0980 375 SUPERFAMILY DNA-glycosylase 162 343 IPR011257 GO:0003824|GO:0006281
Gso6g0980 375 SMART endo3end 172 345 IPR003265 GO:0006284
Gso6g0980 375 SUPERFAMILY TATA-box binding protein-like 51 161 - -
Gso6g0980 375 PANTHER N-GLYCOSYLASE/DNA LYASE 53 363 - -
Gso6g0980 375 CDD ENDO3c 164 342 IPR003265 GO:0006284
Gso6g0980 375 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 57 167 IPR012904 GO:0003684|GO:0006289|GO:0008534
Gso6g0980 375 MobiDBLite consensus disorder prediction 12 47 - -
Gso6g0980 375 Pfam HhH-GPD superfamily base excision DNA repair protein 168 303 IPR003265 GO:0006284
Gso6g0980 375 Gene3D Hypothetical protein; domain 2 162 286 - -
Gso6g0980 375 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 53 363 - -
Gso6g0980 375 Gene3D - 134 345 IPR023170 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0980 K03660 - gmx:100789749 729.169