Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0976 ATGAAGAAAATCCGCAACTCGATCCTACTCTTATCATTCGTGCTGGCAGCCTCGGCGGCGGTTTCATCCGCAGAGCAGATTCCTTCCGCTGCTTACGACCGCGTGCTGTTCCCGGACCGCCGGTGCCAGAAGACGGCGTCGGAGAACATGACGCGGCGAGGATCCTCTGCGGCGGCGGCGGAGTGTGAGGTGTGGAGTGAGTCATGTTCGGAGGCGGTGCTGAGCGTGGCGCGGCGGCCGGAGACGGCGGAGTGGCTGAAGAAGATTCGGCGGAAGATTCACGCGAATCCGGAGCTGGCGTTCGAGGAAATCGAGACGAGTGGTTTGATAAGAGAAGAGTTGGATCTGATGGAAGTTAGTTATCGATACCCTCTAGCCAAGACCGGTATTCGAGCCTGGATCGGCACGGGGGGTCCGCCTTTTGTTGCGATCAGAGCTGACATGGACGCACTTCCAATCCAGGAAGCTGTGGAATGGGAGTACAAATCTAAAGTTGCCGGCAAAATGCATGCTTGTGGGCACGACGCACATGTGGCTATGCTTATCGGCGCTGCCAAGATTTTGAAAACTCGAGAGCATTTATTAAAGGGAACTGTAATTCTGTTATTCCAGCCAGCAGAGGAAGCTGGTAATGGAGCAAAAAGAATGATGCAAGATGGTGCTTTGGAGGACGTGGAGGCTATATTTGCAGCTCATGTATCCCATGAACATCCAACTGGTATAATTGGCTCAAGGCCTGGACCCCTCCTTGCAGGTTGTGGATTCTTCAGAGCTGTCATTAGTGGCAAAAAGGGTCTTGCTGCCAATCCTCACCGTTCTGTTGATCCAGTTTTGGCTGCTTCAGCTGCAGTTATCAGCTTACAGGGTATTGTCTCCCGCGAAGCAAATCCATTGGATTCTCAGGTTGTCTCTGTGACTTCGTTTAATGGAGGCAACAATCTTGACATGATACCTGACTCGGTGGTCCTATTGGGGACTTTCAGAGCGTTCTCTAACACCAGCTTTTACCAGCTACTTGAAAGAATAGAGCAGGTGATTGTGGAACAGGCTAGTGTCTACAGATGCTTGGCAGAAGTTGACTTCTTTGAAAAGGAGTACACAATTTACCCTCCCACGGTTAATGATAACCGAATGTATGAGCATGTGAAAAAGGTGTCCATTGATTTGCTGGGTCATAAGAATTTCAGGGTAGTTCCACCTATGATGGGTGCTGAAGATTTCTCTTTCTACTCCGAGGTGGTTCCCTCAGGTTTCTTCTACATAGGAGTAAGGAATGAAACACTGGGGTCTACTCATACGGGACACTCTCCATATTTCATGATTGATGAAGACGTTCTACCAATAGGTGCTGCTGCTCATGCTAGTATTGCAGAGAGGTACCTCATTGAACATGGTTGA 1398 0.4993 MKKIRNSILLLSFVLAASAAVSSAEQIPSAAYDRVLFPDRRCQKTASENMTRRGSSAAAAECEVWSESCSEAVLSVARRPETAEWLKKIRRKIHANPELAFEEIETSGLIREELDLMEVSYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKTREHLLKGTVILLFQPAEEAGNGAKRMMQDGALEDVEAIFAAHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGKKGLAANPHRSVDPVLAASAAVISLQGIVSREANPLDSQVVSVTSFNGGNNLDMIPDSVVLLGTFRAFSNTSFYQLLERIEQVIVEQASVYRCLAEVDFFEKEYTIYPPTVNDNRMYEHVKKVSIDLLGHKNFRVVPPMMGAEDFSFYSEVVPSGFFYIGVRNETLGSTHTGHSPYFMIDEDVLPIGAAAHASIAERYLIEHG* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0976 465 Pfam Peptidase dimerisation domain 256 350 IPR011650 -
Gso6g0976 465 PANTHER PEPTIDASE M20 FAMILY MEMBER 31 464 IPR017439 GO:0016787
Gso6g0976 465 Gene3D - 251 369 - -
Gso6g0976 465 PIRSF Amidohydrol_AmhX 74 464 IPR017439 GO:0016787
Gso6g0976 465 Pfam Peptidase family M20/M25/M40 143 458 IPR002933 GO:0016787
Gso6g0976 465 CDD M20_IAA_Hyd 86 461 IPR044757 GO:0009850|GO:0016787
Gso6g0976 465 SUPERFAMILY Bacterial exopeptidase dimerisation domain 252 361 IPR036264 -
Gso6g0976 465 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 31 464 - -
Gso6g0976 465 TIGRFAM amidohydrolases: amidohydrolase 88 449 IPR017439 GO:0016787
Gso6g0976 465 Gene3D Zn peptidases 88 446 - -
Gso6g0976 465 SUPERFAMILY Zn-dependent exopeptidases 81 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0976 Gso-Chr6 9416132 9423773 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0976 K21604 K14664 gmx:100785666 905.59