Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0957 ATGAACGCCTACATTATCGGCCTCGTGGTTCCGCTCCTCGTCCTTCTCTACCGCAGCCGCAGCTCCAACAAGCGCCGTGGCATCCCCGCCGAAGCCGGCGGCGAGCCCGGCCTCGCGCTGCGCAATCACCGCTTCGATTCACCGCTCAGCTCCGCGTGGGAGGGCGTCACAACGCTCGCGGAGCTCTTTGAGCGCGCATGCAGGGAGCACCAGGAGCGCGTTCTGCTCGGCACGCGCGCTCTGATCGCGCGTGAGATGGAGACCTCTCCCGACGGTAGAACCTTCGAGAAGCTTGACCTCGGGGACTACCAGTGGCTCACCTACGGGAAAGTGTTTGAATCCGTCTCGAGTTTCGCGTCCGGTTTGGCGTCGCTCGGCCATCGCCGGGAGGAACGCGTTGCTATCTTCGCTGACACCAGAGAACGATGGTTTATTGCACTGCAGGGTTGCTTCAGGAGGAATGTGACGGTTGTGACTATGTATTCGTCGTTGGGAAAGGAAGCTTTGTGTCACTCGTTGAATGAGACAGAGGTTACAACTGTGATTTGTGGGCGCAAAGAATTGAAATCACTAGTAAATATTAGTGGTCAACTTGACTCAGTGAAACGTGTGATATGCATGGACGATGATATCCCATCTGATGCCTCGTCTGCTCAGCATGGCTGGAAAATCACTACGTTTTCTAATGTTGAGAGGCTTGGTAGAGAAAATCCTGTTGAGGCTGATTTACCTCTTTCAGCAGATGTTGCAGTTATAATGTACACAAGTGGAAGTACAGGATTACCTAAGGGTGTGATGATGACACATGGCAATGTCTTGGCAACAGTCTCTTCTGTAATGATAATAGTTCCTAACCTTGGACCAAAGGATGTCTATCTAGCATACTTACCGATGGCTCATATCCTTGAATTAGTAGCTGAGAATTTGATTGCAGCTGTTGGAGGTTGTATAGGATATGGATCTCCTTTGACTTTAACTGATACATCAAACAAAATAAAAAAGGGGAAACAGGGGGATTCCACTGCACTGATGCCAACTGTGATGGCAGCTGTACCAGCAATTCTTGATCGTGTACGTGACGGAGTGCTCAAGAAGGTAAATTCAAAGGGAGGATTGTCAAAGAAGTTGTTTCATTTAGCCTATTCACGAAGATTACAAGCAATTAATGGTTGCTGGTTTGGTGCTTGGGGCTTGGAAAAAGCTCTATGGAATTTTCTCGTGTTCAAAAAGGTTCAAGCAATTTTGGGTGGTCGCATTCGGTTTATACTGTGTGGTGGTGCTCCCCTTTCTGGTGATACCCAAAGATTCATCAATATTTGTCTTGGTGCTCCAATAGGTCAAGGATATGGTCTAACAGAGACTTGTGCTGGTGGGTCATTCTCTGATTTTGACGATACATCTGTTGGACGTGTTGGGCCACCTGTTCCTTGCTCATATATTAAGCTAATTGACTGGCCCGAAGGTGGATATTCAACCAGTGACTCACCAATGGCGCGAGGTGAAATTGTAATTGGTGGTCCAAATGTCACTCTTGGATACTTCAAAAATGAAGAAAAAACAAAAGAATCTTACAAGGTTGATGAAAGAGGAATGAGGTGGTTCTACACTGGTGACATAGGGAGATTCCATAAAGATGGTTGCCTTGAGATCATTGATAGGAAAAAGGACATAGTTAAACTACAGCATGGAGAATATGTGTCCTTGGGAAAGGTTGAGGCAGCTGTTTCTGCCAGTCCCTTCGTAGACAATATCATGTTGCATGCTGATCCTTTTCATAGCTACTGTGTGGCACTCGTTGTAGTTTCTCATTCTGCTTTGGAGCAATGGGCTTCAAAGCAAGGGATTGCTTATTCTGATCTTTCAGAATTGTGCAGCAAAGAAGAAACTGTGAAGGAGGTGCATGCATCACTTGTAAAGGAAGCAAAGACGGCTCGTCTGGAGAAATTTGAGATTCCTGCAAAAGTTAAGTTACTTTCTGAACCATGGACTCCTGAATCTGGCCTAGTCACTGCAGCTCTTAAGCTCAAGAGAGAGATACTTAGAAAGACTTTTCAAGCAGATCTCTCAGAGTTATATGCCTCGTAG 2085 0.4676 MNAYIIGLVVPLLVLLYRSRSSNKRRGIPAEAGGEPGLALRNHRFDSPLSSAWEGVTTLAELFERACREHQERVLLGTRALIAREMETSPDGRTFEKLDLGDYQWLTYGKVFESVSSFASGLASLGHRREERVAIFADTRERWFIALQGCFRRNVTVVTMYSSLGKEALCHSLNETEVTTVICGRKELKSLVNISGQLDSVKRVICMDDDIPSDASSAQHGWKITTFSNVERLGRENPVEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATVSSVMIIVPNLGPKDVYLAYLPMAHILELVAENLIAAVGGCIGYGSPLTLTDTSNKIKKGKQGDSTALMPTVMAAVPAILDRVRDGVLKKVNSKGGLSKKLFHLAYSRRLQAINGCWFGAWGLEKALWNFLVFKKVQAILGGRIRFILCGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGSFSDFDDTSVGRVGPPVPCSYIKLIDWPEGGYSTSDSPMARGEIVIGGPNVTLGYFKNEEKTKESYKVDERGMRWFYTGDIGRFHKDGCLEIIDRKKDIVKLQHGEYVSLGKVEAAVSASPFVDNIMLHADPFHSYCVALVVVSHSALEQWASKQGIAYSDLSELCSKEETVKEVHASLVKEAKTARLEKFEIPAKVKLLSEPWTPESGLVTAALKLKREILRKTFQADLSELYAS* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0957 694 Pfam AMP-binding enzyme 100 561 IPR000873 -
Gso6g0957 694 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 10 693 - -
Gso6g0957 694 SUPERFAMILY Acetyl-CoA synthetase-like 55 692 - -
Gso6g0957 694 ProSitePatterns Putative AMP-binding domain signature. 252 263 IPR020845 -
Gso6g0957 694 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 693 - -
Gso6g0957 694 Gene3D - 50 553 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0957 Gso-Chr6 9224478 9229967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0957 147 693 Acyl Lipid Metabolism Gene Families AT1G77590 76.965 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0957 K01897 - gmx:100778889 1368.99