Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0940 ATGGGTTTCTCAAAGGAACAGCTTCTTGCGCGGTTAAAGGAGCTTCAGGTTCCATTTTCCCAGTATGAGCATCCTGTTGTTTTGACCGTCGACGCTCAGGCTCAATATGTTGGACATTTGGGGGGTGGCCTCAGCAAGAATTTGTTTCTCAAGGACAAGAAAAGCAGGTTGTATATTGTTTCTGCTTTAGCTGGTACCAAAGTAGATCTCAAAGTGTTATCTCAGCGGCTTGGTTTGGGAAAAGGTGGTCTCAGAATGGCACCTGAGGAGGCTTTAGGTGAAGTACTTCAGGTACCCTTGGGTTGTGTCACTCCATTTGCACTTGTGAATGAATCAGCACGAGATGTTTCACTGCTATTGGATCAAGGGTTCAAGTCTCAGAAGCACTGCTTCTTCCATCCACTGTCGAATGACATGTCTATATCTCTAAATGCATGTGATCTTGACAAGTTTCTTAAATCAATTGGAAGAAATCCATCATACGTTGATTTGGAGACCAATCCTACAGTGGGGAAAGATCAACCCCCTGATCTAGCTGCACTAGTTCCATCTGGTTCCATAGTTTTACCCGATCAACCCCAAAAACAATCTTCTTCACAGGTTCCTAAGGATGCAAACCATGTTTCTGTGGATAATGGAGCCAATACAGTTTCAGCTAAAGTTGTCAAGCCATCCTCTGGTGGGAAAAATACAAAGGGGACACCAGCAAAAAATGTTAATTCATCAGGCTCCTTTGCAGATGCTGGGCAATTCGTTGAAGAGATATTGCAAAAAACATCACAATTATTGCTTTCAGAGGTCAAGGACGAAAATATAAAGTTACACGGGGAGCAGCTCGGTACTGTGTTATCTGACAAATTACAGAAAAACCTCAATGCAGAGTTCAAGAGCCTTGCTATGATATTTAAGAACACAGCATATACGGAAGGGTTCCATGCTGGTACTCATTACAGGCCCCCGCTCATGTGA 969 0.4334 MGFSKEQLLARLKELQVPFSQYEHPVVLTVDAQAQYVGHLGGGLSKNLFLKDKKSRLYIVSALAGTKVDLKVLSQRLGLGKGGLRMAPEEALGEVLQVPLGCVTPFALVNESARDVSLLLDQGFKSQKHCFFHPLSNDMSISLNACDLDKFLKSIGRNPSYVDLETNPTVGKDQPPDLAALVPSGSIVLPDQPQKQSSSQVPKDANHVSVDNGANTVSAKVVKPSSGGKNTKGTPAKNVNSSGSFADAGQFVEEILQKTSQLLLSEVKDENIKLHGEQLGTVLSDKLQKNLNAEFKSLAMIFKNTAYTEGFHAGTHYRPPLM* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0940 322 CDD PrdX_deacylase 5 162 - -
Gso6g0940 322 Gene3D - 2 171 IPR036754 GO:0002161
Gso6g0940 322 MobiDBLite consensus disorder prediction 189 242 - -
Gso6g0940 322 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 1 318 IPR040285 -
Gso6g0940 322 PANTHER PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED 1 318 - -
Gso6g0940 322 SUPERFAMILY YbaK/ProRS associated domain 3 164 IPR036754 GO:0002161
Gso6g0940 322 Pfam Aminoacyl-tRNA editing domain 24 151 IPR007214 GO:0002161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0940 Gso-Chr6 9052071 9056438 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0940 - - gmx:100817904 623.624