Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0938 ATGAAATTCACGCCTTCCTCCAAATTCTTAGGCTTTTCAAATCACTTCCACTCCCTTCTCGTACCCTCTTTCTCTCCGACCCCAAAGTTCTCATCTTCCTTTTCCGCCACCATGTCCACTCTTTCCACTCAGAACGACACCGTCACCCACAAAACGCAGCAACCTTTGCAGATTGCAAAGCGCTTAGAGAAATTTCAGACAACAATCTTCACTCAAATGAGCTTGCTTGCCATCAAACATGGGGCCATAAACCTTGGTCAAGGCTTTCCCAACTTTGATGGTCCAGAATTTGTAAAGGAAGCAGCGATTCAGGCAATCAGGGATGGGAAAAATCAGTATGCCCGGGGTTATGGAGTTCCAGACCTGAACATTGCCATTGCTGAGAGATTTAAGAAAGATACTGGACTTGTGGTAGACCCTGAAAAGGAAATTACTGTCACATCTGGATGCACAGAAGCAATTGCTGCAACTATGATAGGATTAATAAATCCTGGTGATGAGGTTATTATGTTTGCTCCTTTTTATGATTCTTATGAGGCCACTTTGTCCATGGCTGGTGCAAAAGTAAAAGGCATCACTTTGCGCCCTCCAGATTTTGCTGTCCCTCTTGAAGAGTTGAAGTCCACCATCTCGAAGAATACCCGTGCCATTCTTATAAACACTCCTCACAACCCTACTGGAAAGATGTTCACTCGTGAGGAGCTCAATTGCATTGCATCTCTTTGCATTGAGAATGATGTTCTGGTTTTCACTGATGAAGTTTATGACAAGTTGGCTTTTGATATGGAGCACATATCGATGGCTTCTTTGCCTGGAATGTTCGAAAGGACAGTGACATTGAACTCCTTGGGGAAGACATTCTCCTTAACAGGATGGAAGATTGGTTGGGCCATAGCACCCCCACACTTATCATGGGGAGTGCGACAGGCACACGCTTTCCTCACTTTCGCAACTGCCCATCCTTTTCAGTGTGCTGCTGCAGCGGCTCTGAGAGCACCAGACTCTTACTATGTAGAGCTGAAGAGGGATTATATGGCAAAGAGAGCTATTTTGATTGAAGGATTGAAGGCTGTTGGCTTCAAGGTATTCCCATCCAGTGGAACCTACTTTGTGGTTGTAGATCACACCCCTTTTGGACTGGAAAATGATGTTGCATTTTGTGAATATCTAGTTAAGGAAGTGGGAGTGGTGGCAATCCCTACCAGTGTGTTTTACTTGAATCCAGAAGAGGGAAAGAATCTAGTCAGATTTACTTTCTGCAAGGATGAGGAAACTATTAGGTCTGCTGTTGAGAGGATGAAAGCAAAGCTTAGAAAATGA 1320 0.4432 MKFTPSSKFLGFSNHFHSLLVPSFSPTPKFSSSFSATMSTLSTQNDTVTHKTQQPLQIAKRLEKFQTTIFTQMSLLAIKHGAINLGQGFPNFDGPEFVKEAAIQAIRDGKNQYARGYGVPDLNIAIAERFKKDTGLVVDPEKEITVTSGCTEAIAATMIGLINPGDEVIMFAPFYDSYEATLSMAGAKVKGITLRPPDFAVPLEELKSTISKNTRAILINTPHNPTGKMFTREELNCIASLCIENDVLVFTDEVYDKLAFDMEHISMASLPGMFERTVTLNSLGKTFSLTGWKIGWAIAPPHLSWGVRQAHAFLTFATAHPFQCAAAAALRAPDSYYVELKRDYMAKRAILIEGLKAVGFKVFPSSGTYFVVVDHTPFGLENDVAFCEYLVKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEETIRSAVERMKAKLRK* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0938 439 Gene3D - 95 333 IPR015421 GO:0003824
Gso6g0938 439 Gene3D Aspartate Aminotransferase, domain 1 72 433 IPR015422 GO:0003824
Gso6g0938 439 Pfam Aminotransferase class I and II 83 432 IPR004839 GO:0009058|GO:0030170
Gso6g0938 439 Coils Coil 430 439 - -
Gso6g0938 439 PANTHER FI04487P 59 439 - -
Gso6g0938 439 SUPERFAMILY PLP-dependent transferases 57 438 IPR015424 -
Gso6g0938 439 CDD AAT_like 83 435 - -
Gso6g0938 439 PANTHER FI04487P 59 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0938 Gso-Chr6 9031287 9033957 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0938 K23977 - gmx:100818968 861.677