Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0927 ATGCTGTTGCGCAACCCTGCGTTGACAGCGTCGCTGCTGTCAGCCACCACAAAGAAGCTCTGCAACCACCGTTGTTCTACACCTGCTGCATTCATGGCATCTTCAGGTGTGGCGTGCAGTTTGCTGGTTTTGTGTGGCAAATCACTGGCAGAGAATGAAACTGCTAAAGCTATAAAGACCAGTAGCACACTGAAGCTTCCCGAGGATGAAAAACTCTCGCTCGTTTTGCATTCGGAGATGGATAATTCTGTTATGCAAGGCTTTTTCCAAGTTCATTCCTACATGGATTCTCTTTCCACCAATCAATTTGGCAGGCTTCTCATTTGGTCTCCAGACTTAAATTCAACGCACGATATCGTTTCTCACAACTTTTGTGAGCTTCCCATTGGTACAGTTTGCATTGCTGATGTTCAGACCAAGGGACGAGGTCGGTCGAAGAATGTCTGGGAGTCTCCATTAGGTTGCCTCATGTTTTCTTTTACTATGCAAATGGAGGATGGACGAGTCGTTCCTTTGGTTCAGTATGTGGTTTCCCTTGCTATGACAGAGGCAATCAAGGATATCTGTGACAAAAATGGGTTACCCAGCATAGATGTTAGAATCAAGTGGCCAAATGATCTTTACTTAAATGGCTGTAAAGTTGGAGGCATTCTTTGTACCTCGACATATAAATCAAAGAAGTTCAATGTTAGTGCAGGATTTCAAACCCTAGAGGAGCTTTATATCAAGACATGGTTGCACAGTGGACAGAGAGTTGTTGTACAGGAGAAGAATGAGGACAAAGTGATCGAACATGTGGTAACTATTCAGGGGTTGACATCCTCGGGATATTTGCTGGCTGTCGGTGATGACAATCATATGTGTGAGCTCCACCCTGATGGTAATAGCTTTGACTTTTTCAAAGGACTGGTCAGAAGGAAACTCCAGTGA 930 0.4441 MLLRNPALTASLLSATTKKLCNHRCSTPAAFMASSGVACSLLVLCGKSLAENETAKAIKTSSTLKLPEDEKLSLVLHSEMDNSVMQGFFQVHSYMDSLSTNQFGRLLIWSPDLNSTHDIVSHNFCELPIGTVCIADVQTKGRGRSKNVWESPLGCLMFSFTMQMEDGRVVPLVQYVVSLAMTEAIKDICDKNGLPSIDVRIKWPNDLYLNGCKVGGILCTSTYKSKKFNVSAGFQTLEELYIKTWLHSGQRVVVQEKNEDKVIEHVVTIQGLTSSGYLLAVGDDNHMCELHPDGNSFDFFKGLVRRKLQ* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0927 309 PANTHER HOLOCARBOXYLASE SYNTHETASE (BIOTIN-(PROPRIONYL-COA-CARBOXYLASE (ATP-HYDROLYSING)) LIGASE) 233 307 - -
Gso6g0927 309 PANTHER HOLOCARBOXYLASE SYNTHETASE (BIOTIN-(PROPRIONYL-COA-CARBOXYLASE (ATP-HYDROLYSING)) LIGASE) 44 233 - -
Gso6g0927 309 Gene3D Bira Bifunctional Protein; Domain 2 95 271 IPR045864 -
Gso6g0927 309 Pfam Biotin protein ligase C terminal domain 247 302 IPR003142 GO:0036211
Gso6g0927 309 CDD BPL 107 233 IPR004408 GO:0004077|GO:0036211
Gso6g0927 309 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 92 278 IPR004143 GO:0036211
Gso6g0927 309 SUPERFAMILY Class II aaRS and biotin synthetases 94 230 IPR045864 -
Gso6g0927 309 TIGRFAM birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 111 226 IPR004408 GO:0004077|GO:0036211
Gso6g0927 309 Pfam Biotin/lipoate A/B protein ligase family 114 233 IPR004143 GO:0036211
Gso6g0927 309 PANTHER BIOTIN PROTEIN LIGASE 44 233 - -
Gso6g0927 309 PANTHER BIOTIN PROTEIN LIGASE 233 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0927 Gso-Chr6 8924183 8929655 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0927 K01942 - gmx:100813650 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g2114 4 51591923 51597496 Gso6g0927 6 8924183 8929655 GST