Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0860 ATGTCCAGACCTCTGCACAGAGGGGTATCTATTCGGATCCCTGATAGCAACAACAATGACTTATGGGACTCTCAATCCAAAGATAAATCAGAAAAGGAAGGTTTGGATAGAAGAGGTTCCTCTGGTCACCCCTCACCCTTGAGGTCTCCCTTTAGGTTGCTTTTTTCGGATAATTCTAATTCCAAATACGGCATCAGTGAGAATGGTTTCTCATCTGATCCCTTCATTATTGGCACTCCAAGAAGTAGGCTCAAGTTGGTTCTTCTTTTCTTGAGGTTTAGTTTAGTGTTTATAGTTATTCTTGCTCTTGCTGGATCTTTTTGGTGGACAATATCGATTTCAACTGCATCAAGAGGTCACATTTACCATGGTTATAGAAGACTCCAAGAGAAACTTGTATCTGACCTGTTGGATATTGGGGAGATTTCTTATGCTCCCTCAAGGCTGAAAGAATTGGAATTCTGTTCTGAGGAGTTTGAAAATTATGTTCCTTGCTTTAATGTTTCTGACAATCTAGCTCTTGGTTTTTCTGATGGAAATGAGTTTGACCGGCAATGTCGTCATGAGCTCAGGCAAAATTGTTTAGTTCTCTCTCCACCAAATTACAAGATTCCTCTTAGGTGGCCTACTGGAAGGGATATTATCTGGATTGCTAATACTAAAATCACTGCACAGGAGGTTCTTTCTTCTGGAAGCTTTACCAAAAGGATGATGATGCTTGATGAAGAGCAAATTTCCTTTCGTTCAGCCTCTCTCATGTTTGATGGTGTTGAAGACTACTCACATCAAATCGCAGAAATGATTGGACTCAGAAATGAATCTAGCTTCATACAAGCTGGGGTTAGAACCATACTGGACATTGGCTGTGGTTACGGTAGCTTTGGAGCACACCTCTTTCAGAGTCAGCTTTTAACTATGTGCATTGCAAGCTATGAGCCTTCTGGCAGTCAAGTTCAGCTTACACTTGAGAGGGGTCTTCCTGCTATGGTTGCTTCTTTCACTTCAAAACAATTGCCTTACCCATCTCTCTCCTTTGACATGTTGCATTGTGCAAGATGTGGCATTGATTGGGACCGAAAAGATGGCATTCTCATGATTGAAGCTGATAGACTTTTACGACCGGGGGGCTACTTTGTCTGGACTTCACCACTTACAAATGCTCGTGACAAAGACAGTCAGAAAAGATGGAAGATCATACAAAGTTTTGCTGAAAACCTTTGCTGGGATATGCTGTCTCAGCAAGATGAAACTGTTGTATGGAAGAAAACTATTAAAAGGAATTGCTATAGTTCAAGAAAGAATAGTTCTCCCCCTCCTTTATGTGGCAAAGGCTATGATGTGGAGTCTCCGTATTATCGAGAACTGCAAAACTGCATAGGAGGAACACATAGCAGCCGCTGGATTTCTGTCAAAGAGAGGCAAACTTGGCCTTCCAGAGATCACTTGAACAAGAAGGAGCTTGCAATCTTTGGGCTGCAATCTGATGAATTTGCTGAAGACTCTGAAAGCTGGAAAGCAGCAGTTCGTAATTATTGGTCTCTTCTGTCACCTTTAATATTTTCTGATCATCCTAAGAGACCTGGTGATGAGGACCCTCCACCACCTTATAACATGCTAAGAAATGTACTAGACATGAATGCTCATGTCGGTGGTTTTAATTCTGCATTGGTGCAAGCTGGAAAATCCTTATGGGTAATGAATGTGGTCCCTCTGAGTGGACTCAACTATCTTCCCTTGATCCAGGACCGAGGTTATGTTGGCGTTTTGCACGATTGGTGTGAGGCCTTCCCAACGTATCCTAGAACCTATGACTTGGTGCATGCAGCTGGACTTTTATCCCTTGAATTTGCTCAGCAGCGCAGATGTACCATGCTTGACATCTTCATTGAAATTGACAGGTTACTCCGTCCAGAGGGTTGGATTATAATTCGTGACATAGTTCCTTTAATAGAGTCAGCCAGAGCTCTAACAACAAGGCTAAAATGGGATGCGCGAGTTGTAGAAATAGAAAGTGACAGCGATCAAAGACTCCTGATCTGTCAAAAACCTTTATTTAAGAGACAAGCAAATTAA 2073 0.4206 MSRPLHRGVSIRIPDSNNNDLWDSQSKDKSEKEGLDRRGSSGHPSPLRSPFRLLFSDNSNSKYGISENGFSSDPFIIGTPRSRLKLVLLFLRFSLVFIVILALAGSFWWTISISTASRGHIYHGYRRLQEKLVSDLLDIGEISYAPSRLKELEFCSEEFENYVPCFNVSDNLALGFSDGNEFDRQCRHELRQNCLVLSPPNYKIPLRWPTGRDIIWIANTKITAQEVLSSGSFTKRMMMLDEEQISFRSASLMFDGVEDYSHQIAEMIGLRNESSFIQAGVRTILDIGCGYGSFGAHLFQSQLLTMCIASYEPSGSQVQLTLERGLPAMVASFTSKQLPYPSLSFDMLHCARCGIDWDRKDGILMIEADRLLRPGGYFVWTSPLTNARDKDSQKRWKIIQSFAENLCWDMLSQQDETVVWKKTIKRNCYSSRKNSSPPPLCGKGYDVESPYYRELQNCIGGTHSSRWISVKERQTWPSRDHLNKKELAIFGLQSDEFAEDSESWKAAVRNYWSLLSPLIFSDHPKRPGDEDPPPPYNMLRNVLDMNAHVGGFNSALVQAGKSLWVMNVVPLSGLNYLPLIQDRGYVGVLHDWCEAFPTYPRTYDLVHAAGLLSLEFAQQRRCTMLDIFIEIDRLLRPEGWIIIRDIVPLIESARALTTRLKWDARVVEIESDSDQRLLICQKPLFKRQAN* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0860 690 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 501 649 IPR029063 -
Gso6g0860 690 MobiDBLite consensus disorder prediction 1 52 - -
Gso6g0860 690 MobiDBLite consensus disorder prediction 22 39 - -
Gso6g0860 690 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 18 688 IPR004159 GO:0008168
Gso6g0860 690 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 18 688 - -
Gso6g0860 690 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 161 682 IPR004159 GO:0008168
Gso6g0860 690 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 195 386 IPR029063 -
Gso6g0860 690 Gene3D Vaccinia Virus protein VP39 241 426 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0860 Gso-Chr6 8188066 8195308 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0860 K23870 - gmx:100795712 1390.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0865 4 9281190 9289296 Gso6g0860 6 8188066 8195308 GST