Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0789 ATGGTGCTCGATTCACAAACTTTCATCGATCACGAATGCATGGAGGTCTTCAAGGATTTTTCCAACCCACCCACTCGTCGCAGGCTGCACCACCCACCCACTCGACCTCATCAAAGTCCGAATGCAACTTCAACAAACCCACACTCTCCGCCCAGCCTTTTTCACCTTTCACGCTCCCAGCCCAATGCCGCCGCCTCCGTCCTCCGGCCCCGTCTCCGTCGGCCTCCGCATCGTCCAGTCGGAGAGCCTCGCCGCAACTACAACGGCGTGTTCGACGCGATACGGCGCATGAGTAACCAAGAGGTCGTTGGTAGCCTGTGGCGCGGTTCAGTGCTTACGGTGAACCGCGCGATGATCGTTACGGCTTCTCAGTTAGCCTCGTACGACCAGTTTAAGGAAACTATTCTGGGACGCGGTTTGATGGAGGACGGGCTGGGGACCCACGTGGCAGCGAGTTTTGCGGCGGGTTTTGTGGCGTCCGTTGCGTCGAACCCCATTGATGTTATAAAGACTAGGGTGATGAACATGAATGCTGAGGCTTACAATGGAGCCTTGGATTGTGCTCTCAAGACTGTTAGGGCTGAAGGACCTCTTGCCCTTTATAAAGGTTTCATCCCTACAATTTCAAGACAGGGTCCTTTCACCGTCGTCCTCTTTGTCACCCTTGAACAAGTCAGGAAGCTGCTTAAGGATTTTTGA 699 0.5436 MVLDSQTFIDHECMEVFKDFSNPPTRRRLHHPPTRPHQSPNATSTNPHSPPSLFHLSRSQPNAAASVLRPRLRRPPHRPVGEPRRNYNGVFDAIRRMSNQEVVGSLWRGSVLTVNRAMIVTASQLASYDQFKETILGRGLMEDGLGTHVAASFAAGFVASVASNPIDVIKTRVMNMNAEAYNGALDCALKTVRAEGPLALYKGFIPTISRQGPFTVVLFVTLEQVRKLLKDF* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0789 232 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 82 232 - -
Gso6g0789 232 Gene3D Mitochondrial carrier domain 58 231 IPR023395 -
Gso6g0789 232 ProSiteProfiles Solute carrier (Solcar) repeat profile. 50 134 IPR018108 -
Gso6g0789 232 SUPERFAMILY Mitochondrial carrier 82 225 IPR023395 -
Gso6g0789 232 MobiDBLite consensus disorder prediction 36 64 - -
Gso6g0789 232 MobiDBLite consensus disorder prediction 20 86 - -
Gso6g0789 232 PRINTS Mitochondrial brown fat uncoupling protein signature 97 114 IPR002030 GO:0006839|GO:0031966
Gso6g0789 232 PRINTS Mitochondrial brown fat uncoupling protein signature 140 158 IPR002030 GO:0006839|GO:0031966
Gso6g0789 232 PRINTS Mitochondrial brown fat uncoupling protein signature 217 232 IPR002030 GO:0006839|GO:0031966
Gso6g0789 232 Pfam Mitochondrial carrier protein 85 136 IPR018108 -
Gso6g0789 232 Pfam Mitochondrial carrier protein 145 230 IPR018108 -
Gso6g0789 232 PANTHER MITOCHONDRIAL UNCOUPLING PROTEIN 5 82 232 - -
Gso6g0789 232 ProSiteProfiles Solute carrier (Solcar) repeat profile. 143 228 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0789 Gso-Chr6 7436382 7440757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0789 84 231 Miscellaneous Gene Families AT5G09470 67.785 1.64e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0789 K15104 - gmx:100794656 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0783 4 8033635 8034837 Gso6g0789 6 7436382 7440757 GST