Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0780 ATGGCAGCCGTGTCCGATCAAGACACTAGTGTATGCACTCACTGTGATCGGGCTATTCCTTCGGCAAATATTGATTTGCATTTTGTTCATTGCTCTCGAAACCTTGAAAGATGCCAAATTTGTGACGACATGATTCCGAAACTACTTGCTGAGGAGCACTATTTAAACACACATGCCCCGGTTGCCTGTTCGCTGTGCAGTGAAACCATGGAACGTGATATTTTAGATATCCATAGAGAGGAAAATTGTCCTAAAAGGATGATCACCTGTGAGTTCTGTGAGTTTCCTTTGCCGGCTATTGATCTGGCTGAGCATCAGGAAGTATGTGGGAATCGAACAGAACTTTGTCACCTTTGTAACAAATATGTTAGACTGCGTGAACTATACAACCATGAAGATAGTTGCAATACAATTCAAGACAATTCTGCAGGGTCTTCAAGGTATGTGAGGCCAGCTGAAAGAGATGAGGGTGCTAGAAGAAGGCCGCAGAATGATTTCTCAGGAAAGCGTCTTTTTTTCACAATAGCATTCACTGGCATTGCTGTTGTCCTCGGATCTATTTTTTTCCAGAGGAAGACAGATCTCAGCAATGTGCAATAG 600 0.43 MAAVSDQDTSVCTHCDRAIPSANIDLHFVHCSRNLERCQICDDMIPKLLAEEHYLNTHAPVACSLCSETMERDILDIHREENCPKRMITCEFCEFPLPAIDLAEHQEVCGNRTELCHLCNKYVRLRELYNHEDSCNTIQDNSAGSSRYVRPAERDEGARRRPQNDFSGKRLFFTIAFTGIAVVLGSIFFQRKTDLSNVQ* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0780 199 MobiDBLite consensus disorder prediction 142 162 - -
Gso6g0780 199 SUPERFAMILY TRAF domain-like 88 138 - -
Gso6g0780 199 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 1 198 - -
Gso6g0780 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 138 IPR013083 -
Gso6g0780 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 30 83 IPR013083 -
Gso6g0780 199 ProSiteProfiles Zinc finger TRAF-type profile. 60 93 IPR001293 GO:0008270
Gso6g0780 199 PANTHER XIAP-ASSOCIATED FACTOR 1-LIKE 1 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0780 Gso-Chr6 7354610 7358816 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0780 - - gmx:100306673 419.468