Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0771 ATGGCCGTTTCAACCACTTTCTCCGCTCCCAAATTGGAGGCCCTATTCCTCAAATGCTCTTCCTCCTCTTCCTCACCATCGCCTTCAAGGGCATCATTCACCACTTTTCCCCGCCAAAACAGAAGAACCCTCATTCAGAGAGGGTTTATTCGCTGCGACGCTCTGGCCTCTGATGCATCATCGGTTGCTCCAAATAATGCCACCGCTCTTGAGCAGCTCAAGATTTCTGCAGCTGATAGATATACAAAGGAAAGGAGCAGCATTATTGTCATTGGGCTCAGTGTGCACACTGCACCTGTGGAAATGCGTGAAAAACTTGCCATTCCAGAAGCCGAATGGCCAAGAGCTATTGCAGAGCTGTGTAGTCTTAATCATATTGAAGAAGCAGCTATTCTGAGCACCTGCAACCGAATGGAGATATATGTTGTTGCCCTGTCCCAACATCGTGGTGTCAAAGAAGTCATGGAATGGATGTCAAAAACAAGTTCCATCCATGTTTCAGAGCTTAGCCAGCACCGGTTTTTACTTTACAACAATGATGCCACGCAGCATCTTTTTGAAGTATCAGCAGGTCTTGACTCTCTTGTTTTGGGGGAAGGTCAAATTCTTGCTCAGGTTAAGCAAGTTGTCAAAGTGGGACAAGGAGTTAGTGGCTTTGGAAGAAACATTAGTGGGCTATTCAAGCATGCAATTACTGTTGGGAAAAGGGTTAGAACTGAGACTAATATTGCTTCTGGGGCAGTTTCTGTTAGCTCAGCTGCCGTTGAGTTGGCCTATATGAAGCTACTTGAAGCCTCACATGATAATGCAAGGATGTTGGTTGTTGGGGCTGGCAAGATGGGAAAGCTTGTGATCAAACATTTGGTGGCAAAAAGTTGCAAAAAGATGGTGGTTGTCAATAGAACTGAGGAGAGAGTTGCTGCAATACGTGAAGAACTGAAGGATATTGAGATTATCTACAAACCTCTTTCAGAAATGCTCACCTGTGCTGGCGAAGCAGATGTAGTTTTCACCAGTACTGCTTCAGAAAGCCCATTATTCTTGAAACATCATGTCAAGGACCTTCCTCCTGCAAATCAAGATGTTGGAGGCCGTCGCTTTTTCATTGATATCTCTGTTCCCCGGAATGTGGGTTCATGTGTCTCAGACCTTGAGTCTGTGCGAGTATACAATGTCGATGACCTTAAAGAGGTTGTGGCTGCCAATAAAGAGGATCGTCTAAGAAAAGCAATGGAAGCACAGGCAATCATTGCTGAAGAATCTAAGCAATTTGAAGCTTGGAGGGACTCGCTGGAAACTGTTCCTACTATTAAGAAATTGAGGGCTTATGCTGAAAGAATCAGGCTTGCTGAGCTTGAGAAGTGCTTAGGTAAGATGGGTGATGATATACCAAAGAAAACACGGAGAGCTGTGGATGATCTTAGTCGGGGTATAGTTAACAAGTTGCTTCATGGTCCAATGCAACATTTAAGGTGTGATGGGAACGACAGCCGGACTCTTAGTGAGACACTGGAGAACATGCATGCTTTGAATAGGATGTTCAACCTTGAGACGGAAATATCTGTTTTGGAGGAGAAGATTCGAGCAAAGGTCGAACAAAACCAGAAATGA 1611 0.4469 MAVSTTFSAPKLEALFLKCSSSSSSPSPSRASFTTFPRQNRRTLIQRGFIRCDALASDASSVAPNNATALEQLKISAADRYTKERSSIIVIGLSVHTAPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAILSTCNRMEIYVVALSQHRGVKEVMEWMSKTSSIHVSELSQHRFLLYNNDATQHLFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVSGFGRNISGLFKHAITVGKRVRTETNIASGAVSVSSAAVELAYMKLLEASHDNARMLVVGAGKMGKLVIKHLVAKSCKKMVVVNRTEERVAAIREELKDIEIIYKPLSEMLTCAGEADVVFTSTASESPLFLKHHVKDLPPANQDVGGRRFFIDISVPRNVGSCVSDLESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIAEESKQFEAWRDSLETVPTIKKLRAYAERIRLAELEKCLGKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGNDSRTLSETLENMHALNRMFNLETEISVLEEKIRAKVEQNQK* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0771 536 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 412 516 IPR015896 GO:0008883|GO:0033014|GO:0050661
Gso6g0771 536 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 87 243 IPR036343 GO:0008883|GO:0033014|GO:0050661
Gso6g0771 536 Gene3D - 86 246 IPR036343 GO:0008883|GO:0033014|GO:0050661
Gso6g0771 536 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 1 536 - -
Gso6g0771 536 Coils Coil 299 319 - -
Gso6g0771 536 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 410 514 IPR036453 GO:0008883|GO:0033014|GO:0050661
Gso6g0771 536 PANTHER GLUTAMYL-TRNA REDUCTASE 1 536 - -
Gso6g0771 536 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 91 241 IPR015895 GO:0008883|GO:0033014|GO:0050661
Gso6g0771 536 Coils Coil 513 533 - -
Gso6g0771 536 CDD NAD_bind_Glutamyl_tRNA_reduct 88 410 - -
Gso6g0771 536 ProSitePatterns Glutamyl-tRNA reductase signature. 184 207 IPR018214 GO:0008883
Gso6g0771 536 Gene3D - 247 399 - -
Gso6g0771 536 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 246 406 IPR036291 -
Gso6g0771 536 Pfam Shikimate / quinate 5-dehydrogenase 266 398 IPR006151 -
Gso6g0771 536 Hamap Glutamyl-tRNA reductase [hemA]. 87 514 IPR000343 GO:0008883|GO:0033014|GO:0050661
Gso6g0771 536 TIGRFAM hemA: glutamyl-tRNA reductase 88 497 IPR000343 GO:0008883|GO:0033014|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0771 Gso-Chr6 7230069 7233168 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0771 K02492 - gmx:100810957 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0765 4 7776707 7779533 Gso6g0771 6 7230069 7233168 GST