Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0766 ATGTGTAATCCAAAACCATCCTCATCATCCCCATTTCTGTGTCCCACAAAAAACCACATCATAAGTACTCCCGACCCCAAACTCATAAATCACCCTCCTCCCGTTGATGATCAACTTCAAGATGAACTTCACAGATGGCCAACTCCTAATGAGATAGTAGCAGAAATGAAGGCCATAGGAAAGATATCAGGGCCAACAGCTCTCACCGGTTTAATCATATATTCGAGAGCCATGATCTCCATGGTCTTCCTGGGCTACCTAGGCGAGATGGAGCTCGCCGGAGGCTCCCTCTCGATCGGGTTCGCCAACATCACCGGCTACTCCGTGATCTCGGGCCTGGCCATGGGAATGGAACCCATTTGCGGGCAAGCCTACGGTGCCAAACAATTGAAGACACTGGGCCTAACCCTCCAGAGAACCGTCCTCCTTCTCCTCTCAAGCTCCCTCCCCATTTCCCTGACGTGGCTGAACATGAAGAACATCCTCTTATGGTGCGGGCAGGACCATGAGATCTCCAGCACAGCACAGACCTTCATCCTCTTCTCTATCCCAGACCTCTTCCTCCTCTCCCTCCTCCACCCTCTGAGAATCTACCTCAGAACACAAAGCATCACATTACCCCTAACCTACTGCTCCGCCGTCTCCGTCCTCCTCCACGTCCCTCTCAACTTTTTATTAGTGGTCCACTTAAAAATGGGTGTGTCTGGCGTCGCAATAGCGATGGTGTGGACCAATCTAAACCTCTTCCTCTTCCTTTCTTCCTTTATTTACTTCTCCGGGGTTTATAAGGACTCCTGGGTTCCCCCTAGCACTGACTGCCTCAGGGGATGGTCTTCCTTACTTGCACTTTCTGTTCCAACCTGCGTCTCCGTTTGTCTAGAATGGTGGTGGTACGAACTCATGATCATTCTCTGTGGACTCCTTCTGAACCCAAAAGCCACCATTGCCTCCATGGGTATCCTCATTCAAACCACTTCCTTGGTCTACGTCTTCCCTTCTTCTCTCAGCCTCGCCGTCTCCACCAGAGTCGGGAATGAGTTAGGCGCCAACCGCCCCGCCAAAGCACGCATTTCCATGATAGTCTCACTCGCCTGTGCTGTTGCCTTGGGCGTCACCGCCATGCTCTTCACCACTTTAATGAGACACCGCTGGGGGAGATTCTTCACCTCTGACCAACAAATTCTCCACCTTACGTCCATTGCTTTGCCCATTGTTGGCCTCTGCGAGCTTGGAAACTGCCCCCAGACCACGGGCTGCGGCGTCTTGAGAGGCAGCGCCAGGCCCACCGTCGGTGCTAATATCAATTTGGGCTCCTTTTATTTGGTTGGCATGCCTGTCGCGGTTCTTCTCGGGTTTGTTGGGAAAATGGGCTTTCCTGGGCTCTGGCTTGGGTTGCTTGCGGCCCAAGGCTCATGTGCTGCTCTCATGATATTCGTTCTCTGCACCACTGACTGGAACGCCCAAGTGCAAAGGGCCAACGAGCTTACTAATGCTAATTCTGCTCCTTCCAAATTACCTACTACGGAGTGTAACAATGTTCGTCTTCCAGAGATTCTTGTCATGGACACGGAGGATCATCATGATGAGATTATTACCAAGACACCTTCTCTTGAAACAGACCCTCTCATTATACACACTTCCAAATGA 1647 0.5143 MCNPKPSSSSPFLCPTKNHIISTPDPKLINHPPPVDDQLQDELHRWPTPNEIVAEMKAIGKISGPTALTGLIIYSRAMISMVFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQLKTLGLTLQRTVLLLLSSSLPISLTWLNMKNILLWCGQDHEISSTAQTFILFSIPDLFLLSLLHPLRIYLRTQSITLPLTYCSAVSVLLHVPLNFLLVVHLKMGVSGVAIAMVWTNLNLFLFLSSFIYFSGVYKDSWVPPSTDCLRGWSSLLALSVPTCVSVCLEWWWYELMIILCGLLLNPKATIASMGILIQTTSLVYVFPSSLSLAVSTRVGNELGANRPAKARISMIVSLACAVALGVTAMLFTTLMRHRWGRFFTSDQQILHLTSIALPIVGLCELGNCPQTTGCGVLRGSARPTVGANINLGSFYLVGMPVAVLLGFVGKMGFPGLWLGLLAAQGSCAALMIFVLCTTDWNAQVQRANELTNANSAPSKLPTTECNNVRLPEILVMDTEDHHDEIITKTPSLETDPLIIHTSK* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0766 548 PANTHER MULTIDRUG RESISTANCE PROTEIN 33 509 - -
Gso6g0766 548 TIGRFAM matE: MATE efflux family protein 75 462 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso6g0766 548 CDD MATE_eukaryotic 55 491 IPR045069 GO:0042910|GO:1990961
Gso6g0766 548 Pfam MatE 286 449 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso6g0766 548 Pfam MatE 65 225 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso6g0766 548 PANTHER PROTEIN DETOXIFICATION 33 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0766 Gso-Chr6 7160104 7162390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0766 K03327 - gmx:100788339 1043.88