Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0748 ATGGCGTCCAACGATTCCGATTCGCAGATGAAGATCGTACATGGCGATGCTGGTTACATACTTGAAGACGTTCCTCACTTCGCCGACTATATTCCAAATCTTCCTACATATCCGAATCCGCTTCGATCCAATCCTGCTTACTCGGTTGTTAAGCAGTATTTCGTGCACATGGACGACACTGTTCCTCAGAAGGTTGTTGTTCACAAGGATAGTCCAAGAGGTGTACATTTTCGACGTGCAGGGCCTCGGCAAAAGGTATACTTTAAATCGGATGAAGTGCATGCATGCATTGTCACGTGTGGTGGACTCTGCCCTGGCCTCAACACTGTCATAAGGGAAATTGTCTGTGGTCTTTCCTACATGTATGGTGTTAACAAAGTCCTTGGCATAGATGGTGGTTATAGAGGCTTTTATTCCAAAAACACCATTACTTTAACACCTAAGGTGGTCAATGATATCCATAAGCGTGGGGGTACGATTCTTGGGACATCACGAGGGGGGCATGATACTGGCAAGATAGTTGACAGCATCCAGGATCGAGGAATTAATCAGGTTTATATTATTGGAGGAGATGGAACACAGAGAGGAGCGACTGTGATTTACGAGGAAGTTAGACGGCGGGGTCTGAAAGTAGCAATTGCTGGAATTCCTAAAACCATAGACAATGACATCCCGGTTATTGACAAATCTTTTGGTTTTGATACTGCGGTTGAGGAGGCTCAACGTGCCATTAATGCAGCTCATGTTGAAGCTGAAAGTATTGAGAATGGCATTGGTGTTGTAAAGCTAATGGGACGTTACAGTGGTTTTATTGCAATGTATGCCACTCTTGCTAGCAGAGATGTGGACTGTTGCTTGATTCCAGAGTCACCCTTCTACCTTGAAGGAAAGGGTGGACTTTTTGAATTTATTGAGAAAAGGCTGAAAGAAAATGGACATATGGTCATAGTCATAGCCGAGGGAGCAGGACAAGATCTTCTTACAGAAAGCATGCAAGCCATGGATCAGAAGGATGCTTCTGGAAACAAATTACTTCAAGATGTTGGTTTATGGATATCTCACAAGATTAAGGATCACTTTGCAAGGAAGGATAAAATGCCCATCAATCTTAAATATATAGATCCAACTTACATGATTCGGGCAATTCCAAGCAATGCATCAGACAATGTCTACTGTACACTTCTTGCTCAGAGTGCAGTCCATGGTGCAATGGCAGGGTATACTGGATTTACAGTTGGACTGGTCAATGGCAGACAGACTTATATTCCATTCATTAGAATCAATGAGAGGCAGAACAAGGTTGTGATTACTGACAGAATGTGGGCAAGACTCCTTTCTTCAACCAACCAGCCTAGCTTTTTGAGCCCTAAAGATTTAGAAGAAGCCAAGAAAGCAGAATCTCCGACACAATTGTTGGAAGAGAACAATTGCAATGATGTTGGTGATGCCGAGAAAGAACAACCTCCCAAAGATGAACAAGAATCAGGAAACCACACAGACAATGGTATCAAGACACAAAATTAG 1524 0.4304 MASNDSDSQMKIVHGDAGYILEDVPHFADYIPNLPTYPNPLRSNPAYSVVKQYFVHMDDTVPQKVVVHKDSPRGVHFRRAGPRQKVYFKSDEVHACIVTCGGLCPGLNTVIREIVCGLSYMYGVNKVLGIDGGYRGFYSKNTITLTPKVVNDIHKRGGTILGTSRGGHDTGKIVDSIQDRGINQVYIIGGDGTQRGATVIYEEVRRRGLKVAIAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINAAHVEAESIENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIEKRLKENGHMVIVIAEGAGQDLLTESMQAMDQKDASGNKLLQDVGLWISHKIKDHFARKDKMPINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTVGLVNGRQTYIPFIRINERQNKVVITDRMWARLLSSTNQPSFLSPKDLEEAKKAESPTQLLEENNCNDVGDAEKEQPPKDEQESGNHTDNGIKTQN* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0748 507 Pfam Phosphofructokinase 96 401 IPR000023 GO:0003872|GO:0006096
Gso6g0748 507 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 2 481 - -
Gso6g0748 507 PANTHER - 2 481 - -
Gso6g0748 507 PIRSF ATP_PFK_TP0108 1 458 IPR012004 GO:0003872|GO:0005524|GO:0006096
Gso6g0748 507 PRINTS ATP-dependent phosphofructokinase family signature 97 116 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso6g0748 507 PRINTS ATP-dependent phosphofructokinase family signature 181 197 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso6g0748 507 PRINTS ATP-dependent phosphofructokinase family signature 214 231 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso6g0748 507 PRINTS ATP-dependent phosphofructokinase family signature 232 250 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso6g0748 507 PRINTS ATP-dependent phosphofructokinase family signature 253 269 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso6g0748 507 PRINTS ATP-dependent phosphofructokinase family signature 310 322 IPR022953 GO:0003872|GO:0006002|GO:0006096
Gso6g0748 507 Coils Coil 237 257 - -
Gso6g0748 507 Gene3D - 90 279 - -
Gso6g0748 507 MobiDBLite consensus disorder prediction 478 498 - -
Gso6g0748 507 MobiDBLite consensus disorder prediction 452 507 - -
Gso6g0748 507 SUPERFAMILY Phosphofructokinase 28 462 IPR035966 GO:0003872|GO:0006096
Gso6g0748 507 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 24 454 IPR012004 GO:0003872|GO:0005524|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0748 Gso-Chr6 6913353 6920021 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0748 K00850 - gmx:100803139 1029.62