Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0717 ATGGCCACTTTATATAAAACATTCATAGTGAATTGCTCCATTCAGAAAAGACCCTCCCATGTCTCGGACAATTCTCGCCACTACAACCTTCCACTCTTCCCTGCCTTTAAGCCACTCAAGAAAGTTCTGCCTGAAGTCCCCTTGCAAATTGATGATGTTAAGAAAACCATGTCAAAAACTGCAGCTATATTACTTGATGCCTTTGTAGATTCGTTCTTTGAATTTATTGACCAACCACTGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGTGGAGTTAGGTGAAGCCATAGTTGTGACAAGCATCCAAGGACAAATTCCAGATGATTTTCCCGAGGGTGTCTACATTAGAAACGGTCCAAATCCACTTTTTGGAGGACTGCAATCAACAAATTCTATCTTTGGGAGGTCAAGTTACATATGGGTGGAAGGAGAGGGAATGCTTCACGCAATTTATTTTAAAAGGTGGAGTCCAGGGATTTGGACTGTCCTCTACAACAACAAGTACGTTGAAACCGATACATACAAGGTTGAAAAGCAACGAAGTAAACCATTGTTTCTACCGGCCATAGAAGGCGATTCACCAGCCATTTTGTCTGCTTATCTGCTAAATTGGTTGCGATTTGGCAAAGTAAACAAGTACATCAGCAACACCAATGTCTTTGAGCACTCAGGGAAGTTTTACTCCGTTGCTGAAAATCACATTCCACAAGAGATTGATATCTTTACACTGAAAACTTTAAGGAATTGGAATGTCAATGGTGCCTGGGATCGTCCTTTTACTAGTCATCCAAAGAAAGTTCCAGGTACAGGGGAACTAGTTACATTTGGGGTTGCAGCAACCAAACCTTTTGCCGTAGTTGGAATTATTTCTGCTGATGGCAAGAAATTGGTTCACAAAGTTGACCTCAAACTAAACAGGTGCACTCTTTGCCATGACATAGGTGTTACACAGAGGTACAATGTGATCATGGATTTCCCACTAACCATTGATCTAAACAGACTTCTTAGAGGAGGCCCATTAATGAAGTATAATAAGGAGGAATATGCAAGGATTGGAGTAATGCCACACTATGGTGATGCCAACTCAATCAAATGGTTTGAGGTTGTAGTGAGGGGTTGCAGATCTCTTGATTCATTAATTCCTGGACCTGACCCGAGTTTGAAGGAATTTGAGTGGTTATCTCGTTGTCACGAGTGGCGATTGAATATGCAAACGGGAGAAGTTAAGGAGAGAGGTCTCTGTGGAGCCAACATAGTTTATATGGATTTTCCTATGATCAATGGAAACTTCATAGGTATTAGGAATAGATATGCATACACTCAAGTAGTTGATCCCATTGCAAGCTCTACTCAAGACGTGCCAAAATACGGAGGTTTAGCGAAGCTCTACTTTGAAGAATCATGTGCAAAGTTTTCCATGCAGAGAAACAGAGAGCAACCTGAAGAGCCTATAAGAGTGGAATGCCACATGTTTGAGAAGAACACATTTTGCAGTGGGGCTGCCTTTGTCCCCAGAGATGGTGGTCTTGAAGAAGATGACGGTTGGATCATAGCTTTTGTTCACAATGAAGATACAAACATATCTGAAGTTCATATAATTGACACAAAGAAGTTTTCTGGTGAAACGGTTGCTAAAATTACAATGCCTCGTAGAGTACCATATGGATTTCACGGAGCTTTCATGCCAATTTCATTTGAGACACAGTAG 1710 0.4135 MATLYKTFIVNCSIQKRPSHVSDNSRHYNLPLFPAFKPLKKVLPEVPLQIDDVKKTMSKTAAILLDAFVDSFFEFIDQPLLPSQSNFAPVVELGEAIVVTSIQGQIPDDFPEGVYIRNGPNPLFGGLQSTNSIFGRSSYIWVEGEGMLHAIYFKRWSPGIWTVLYNNKYVETDTYKVEKQRSKPLFLPAIEGDSPAILSAYLLNWLRFGKVNKYISNTNVFEHSGKFYSVAENHIPQEIDIFTLKTLRNWNVNGAWDRPFTSHPKKVPGTGELVTFGVAATKPFAVVGIISADGKKLVHKVDLKLNRCTLCHDIGVTQRYNVIMDFPLTIDLNRLLRGGPLMKYNKEEYARIGVMPHYGDANSIKWFEVVVRGCRSLDSLIPGPDPSLKEFEWLSRCHEWRLNMQTGEVKERGLCGANIVYMDFPMINGNFIGIRNRYAYTQVVDPIASSTQDVPKYGGLAKLYFEESCAKFSMQRNREQPEEPIRVECHMFEKNTFCSGAAFVPRDGGLEEDDGWIIAFVHNEDTNISEVHIIDTKKFSGETVAKITMPRRVPYGFHGAFMPISFETQ* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0717 569 PANTHER OS06G0162550 PROTEIN 35 564 - -
Gso6g0717 569 Pfam Retinal pigment epithelial membrane protein 89 563 IPR004294 GO:0016702
Gso6g0717 569 PANTHER BETA-CAROTENE DIOXYGENASE 35 564 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0717 Gso-Chr6 6580754 6586215 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0717 - - gmx:100817738 1159.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0714 4 7001545 7002746 Gso6g0717 6 6580754 6586215 GST