Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0705 ATGGCATCTATTAGAAGAACCTTGTCTCCTGTGCCTAGAGTTGGAACTGTAGCAAATGGAGAAGTGTGTTCAGTAGCTTCTCCATTGTCGAAGTCCTCGTCGAGTCCCCAGAACTTCTCACCGTCAGTTGGATTGGACTACCGTGCACTTGTGTTTGGTGTTTTCTCCCCGAGGTCTTTTTGGGCTCTTGAGAGATCAAAGCCAAGGGGGCAGCTTTGGAGGAAGGTGCTTTTCCATTTTTTCATTTGTTTCATTGTTGGTGTTTCTATGGGACTCATCCCACTTGCATCAACACACATGTCCTCAAATATCATGCCAAAACAACAAGCCTTCTCCTTTGAGATGATATCTGCTGTGGGGAATTTCCAGCCATTTGAGAATGTAAAGATAAATGTGACGCCATCGATCGATAAGGCTGTGAATTTTAATGCTACTTTTTATTCAACTGTGAAAGAACAGGAACTAATAGATGGAGTAGCATATAATGTCTCAGATAGCCAAATCAGTGAAAATCCATCTTTGGAGTCTCAGAAGCTTCTCATAATTGTGACCCCAACATACAATCATCTATTTCAAGCATATTACTTGCATCGCTTGTCTCAGACATTAAAATTGGTCCCACCTCCCTTGTTGTGGATTGTTGTTGAGATGACTTCTCAATCTGAAGAAACTGCTGACATCTTAAGGAGTAGTGGGATTATGTACAGGCATCTCGTTTGTAAAACAAATCTAACCAACCCAAGCCATAGGAGCATTCTTCAAAGAAATGTTGCAATGGCTCACATTGAAATTCATCGTCTTGATGGAATTGTTTACTTTGCAGATGATGATAACATCTACTCATTGGACCTCTTTCAGCAAATGAGAGAAACAAGGCGATTTGGAACATGGACTGTAGCAAGATTATCAGGGGATAAAAGTAGCATTGTCTTGCAAGGGCCCATTTGTAATGGAAGTCGAGTAATTGGATGGCATACAAATGAATCAAATGGGAAATCTAAAAGATTTCATGCTGAAATGCCAGGTTTTTCCTTCAATAGTACAATACTATGGGATCCAAAGAGGTGGCATCGCCCCACTCTTGAACCTATCAGGCAACTTGACTCGGTCAAGGAAAGTTTGTGGGTTAGCACATTGATTGAGCAGGTGGTTGAAGATGAAAGTCAAATGGAGGGCTTAATGCACAACTGCTCGAGAGTTATGGTCTGGCAGATTGATCTTGAATCATCTTATTCATCCTATCCTCAGAAATGGATTGCAAAGAACAACCTAGATGCCATTGTTCATCTTCCACTTGTGTGA 1302 0.4124 MASIRRTLSPVPRVGTVANGEVCSVASPLSKSSSSPQNFSPSVGLDYRALVFGVFSPRSFWALERSKPRGQLWRKVLFHFFICFIVGVSMGLIPLASTHMSSNIMPKQQAFSFEMISAVGNFQPFENVKINVTPSIDKAVNFNATFYSTVKEQELIDGVAYNVSDSQISENPSLESQKLLIIVTPTYNHLFQAYYLHRLSQTLKLVPPPLLWIVVEMTSQSEETADILRSSGIMYRHLVCKTNLTNPSHRSILQRNVAMAHIEIHRLDGIVYFADDDNIYSLDLFQQMRETRRFGTWTVARLSGDKSSIVLQGPICNGSRVIGWHTNESNGKSKRFHAEMPGFSFNSTILWDPKRWHRPTLEPIRQLDSVKESLWVSTLIEQVVEDESQMEGLMHNCSRVMVWQIDLESSYSSYPQKWIAKNNLDAIVHLPLV* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0705 433 CDD GlcAT-I 178 408 IPR005027 GO:0015018|GO:0016020
Gso6g0705 433 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9L-RELATED 1 427 - -
Gso6g0705 433 Pfam Glycosyltransferase family 43 199 408 IPR005027 GO:0015018|GO:0016020
Gso6g0705 433 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 427 IPR005027 GO:0015018|GO:0016020
Gso6g0705 433 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 179 428 IPR029044 -
Gso6g0705 433 SUPERFAMILY Nucleotide-diphospho-sugar transferases 179 424 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0705 Gso-Chr6 6500253 6504834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0705 1 430 Glycosyltransferase AT1G27600 44.548 1.55e-121 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0705 K20869 - gmx:100790621 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0701 4 6881513 6886341 Gso6g0705 6 6500253 6504834 GST