Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0683 ATGGTCCTTCTATACCTCCCAAGGTTTCCTCTCTACCTCGTTACCTTATCTCACTCCCTCCCTCGTCGAACCTACTCCAAAACCACCCTCTTACGCCCACCCAAATCCACTCTCACAACCTCACAACCCTTAACCGTTAACCCTTCCCCCACAGAGCTATCCCTCGAGAAGCTCTTCGTTCCGCCGGAGACCACCGTGTCCCTCGAAAGTTCAAGAGTCTTGAACGGTTCTAACATTCTGCTGAGTAACTACGCCAACGATGCTCAGGTATTGCAGGCCGAGTTTGTGAAAAGCAGTGTGAAGACTGAAGACTGTCCCTCCGATGGAATTCCCGAGTTCGCTCTCGTTGGCCGCTCCAACGTCGGCAAATCCTCGCTCCTTAATTCCCTCGTCCGCCGCAAGAAACTCGCCTTAACTTCGAAGAAACCCGGCAAAACACAATGTATAAACCATTTTCGGATTAATAATAGCTGGTACCTGGTTGATTTGCCTGGTTATGGGTATGCATCTGCACCACATGAACTTAGGATGGATTGGGAAAAATTCACCAAGGACTATTTCCTTAACCGCTCAACCTTAGTTTCAGTATTCCTTCTAATAGATGCTAGCATTCCTGCTAAACAAATTGATCTTGACTATGCCAGTTGGTTGGGTCAGAATCAGATCCCAATGACATTAATCTTCACCAAATGTGACAAGCGGAAAAAGAAAAAGAATGGAGGCAAAAGACCAGAAGACAATGTTAATGATTTTCAGGATTTGATTCGAGGTTTCTTCCAATCCGTGCCTCCGTGGATCATGACCAGTAGCGTTACTAATCAGGGTCGTGATGAGATACTCCTCCATATGGCCCAGCTACGGAACTACTGGCTCAAGCACTAG 882 0.4705 MVLLYLPRFPLYLVTLSHSLPRRTYSKTTLLRPPKSTLTTSQPLTVNPSPTELSLEKLFVPPETTVSLESSRVLNGSNILLSNYANDAQVLQAEFVKSSVKTEDCPSDGIPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAPHELRMDWEKFTKDYFLNRSTLVSVFLLIDASIPAKQIDLDYASWLGQNQIPMTLIFTKCDKRKKKKNGGKRPEDNVNDFQDLIRGFFQSVPPWIMTSSVTNQGRDEILLHMAQLRNYWLKH* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0683 293 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 35 290 - -
Gso6g0683 293 CDD YihA_EngB 112 286 IPR030393 GO:0005525
Gso6g0683 293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 289 IPR027417 -
Gso6g0683 293 TIGRFAM GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 93 281 IPR019987 GO:0005525
Gso6g0683 293 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 35 290 - -
Gso6g0683 293 Hamap Probable GTP-binding protein EngB [engB]. 98 287 IPR019987 GO:0005525
Gso6g0683 293 Pfam 50S ribosome-binding GTPase 113 230 IPR006073 GO:0005525
Gso6g0683 293 Gene3D - 85 289 IPR027417 -
Gso6g0683 293 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 109 289 IPR030393 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0683 Gso-Chr6 6314245 6319797 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0683 K03978 - gmx:100784426 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0683 4 6673223 6677203 Gso6g0683 6 6314245 6319797 GST