Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0678 ATGGGTTGTGCACAGTCCCGAATAGACAACGAGGAATCCGTGTCTCGCTGCAAGGACCGTAAAAATCTCATCAAAGACGCCGTCGTCGCTCGCAACGCCTTCGCCGCCGGCCATTCAGGCTACGCCGTTGCGCTCAAGAACACCGGCGCCGCCCTCAGCGACTACGCCCACGGCGAGACCCACGACCCCCACCCTCCGCCCCTCGACCCTCCCTCCTCCTCCGCCGACCCTCCGCCGCCGCCGCCGCCACCAATCGACGACAGTCTCCCTCCCCCGCCGCCGCCTCTCCCGGAGTTCTCCCCCGCCCCGGCGCCGCTTTCTCGCTCCGTCACCATGCCCGCCGGCGTCATGCACCACTACCGCCACCGCAGCCCCGTCCCCCTCTCCATCGCCGAGGAGGACGAAGAGCAAGATGCAACCCCCAAGCTGGCGAGGAAAACCGCCGGATCGCCGCCTCCGGAGATGAAGACTCCGCCGCCGCCGCCTCCGGAGTCGAAGGGCATGGCTTGGGATTACTTCTTCATGGTGGAGAACATGCCTGGACGTTCTCTCAGTGCTGAAGATGATAATGATGATGATGATGATGATGATAATCATATTCATAACCATAATCATAATGATGATGGTGAGCGTAAAATGGAGAATGTGGTTGAAGATGAGGTTGAGCCTAAGACACCAGATAAAGTGCAGGAACATGAGAATGTGAGTATTCATGAGGAGCATGATGATGGGATAAGTGAAGCGAAGAAATACATTGAGCATTCTAAAACTGCTCCTGCTGAGTTTAGAAGAGCTATAAAGGTGGTTCCTTCTGTTACTCTTATGCAGATTCTCAATGTCCTTGATGATCACTTCTTGAAGGCCTCCGAGGGCGCTCAGGAAGTTACCAAGATGCTCGAGGCTACTAGGTTGCATTATCATTCCAATTTCGCCGATAATCGCGGGCACATTGATCATTCTGCTAGGGTTATGCGTGTCATAACATGGAATAGGTCCTTCAGAGGTGTGTCCAATGGGGATGCCGCTAAAGATGACATTGATTCTGAGGAATATGAAACTCATGCCACTGTGTTGGATAAGTTGTTGGCATGGGAGAAGAAACTTTATGAAGAAGTCAAGCAAGGTGAGCTTATGAAGTTTGAATATCAGAGAAAAGTTGCAATTCTAAACAAGCAGAAGAAGCGTGGTGCCAGTGCTGAATCCTTAGAAAAGACTAAAGCAGCTGTTAGCCATTTGCATACAAGATATATTGTTGACATGCAGTCGATGGATTCAACAGTTTCAGAAGTGAACCATATTCGAGATGCCCAGTTGTATCCGAAACTTGTTGCTCTTGTTATTGAGATGGCAAATATGTGGGAAAATATGTGCTTACATCATGACAGCCAGCTGAAAATAGTTACAGACCTCAAATCTCTTGATATTTCTCAAGCTCCTAAGGAAACAACCAAGCATCATTATGATCGCACTGTGCAACTTGAGAAAGTCATCCTGGAATGGCATTTACAATTTGAGAAGCTTGTGACTCAACAGAAACATTACATCAAAGCTCTTAACAGCTGGCTAAAGTTAAATCTCATTCCTATTGAAAGCAACCTAAAAGAGAAAATCTCATCCCCTCCAAAAGCTCAGAATCCTCCAATCCAAGCCCTTCTCCATGCATGGCATGATTATGTTGACAAGCTTCCTGATGAGCTTGCCAAATCTGCTATTTCCTCCTTTGCTGCTGTGATAAAGACGATCTTACTTCAGCAGGAGGAAGAGATGAAGTTAAAGGAGCGATGTGAGGAAACCAGAAAGGAATACTTGAAGAAAAAACAAGCATTTGAGGAATGGTACCAGAAGCATTTAATGCGGAGAGGGCCTGATGAAGCAGAACATGAAAGAGGAGAGGAAGTAAACACAAATAATCCTGTCTCGGAGAGGCAGTTTGTTGTTGAGAGCTTGCAGAAGAGATTAGAAGAGGAAATTGAATCCCACCAAAAACATTGCATTCAGGTGCGAGAGAAATCACTGCAGAGTCTCAAAACTCGCTTGCCTGAACTCTTCCGTGCATTGTCAGACTATGCTCATGCCTGTGCTGAGGCTTATGAGAAGCTGAAGTTAATCACACAGTCACGAGGTGGTGGGGCATAA 2136 0.4822 MGCAQSRIDNEESVSRCKDRKNLIKDAVVARNAFAAGHSGYAVALKNTGAALSDYAHGETHDPHPPPLDPPSSSADPPPPPPPPIDDSLPPPPPPLPEFSPAPAPLSRSVTMPAGVMHHYRHRSPVPLSIAEEDEEQDATPKLARKTAGSPPPEMKTPPPPPPESKGMAWDYFFMVENMPGRSLSAEDDNDDDDDDDNHIHNHNHNDDGERKMENVVEDEVEPKTPDKVQEHENVSIHEEHDDGISEAKKYIEHSKTAPAEFRRAIKVVPSVTLMQILNVLDDHFLKASEGAQEVTKMLEATRLHYHSNFADNRGHIDHSARVMRVITWNRSFRGVSNGDAAKDDIDSEEYETHATVLDKLLAWEKKLYEEVKQGELMKFEYQRKVAILNKQKKRGASAESLEKTKAAVSHLHTRYIVDMQSMDSTVSEVNHIRDAQLYPKLVALVIEMANMWENMCLHHDSQLKIVTDLKSLDISQAPKETTKHHYDRTVQLEKVILEWHLQFEKLVTQQKHYIKALNSWLKLNLIPIESNLKEKISSPPKAQNPPIQALLHAWHDYVDKLPDELAKSAISSFAAVIKTILLQQEEEMKLKERCEETRKEYLKKKQAFEEWYQKHLMRRGPDEAEHERGEEVNTNNPVSERQFVVESLQKRLEEEIESHQKHCIQVREKSLQSLKTRLPELFRALSDYAHACAEAYEKLKLITQSRGGGA* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0678 711 MobiDBLite consensus disorder prediction 133 168 - -
Gso6g0678 711 Pfam Protein of unknown function (DUF632) 274 579 IPR006867 -
Gso6g0678 711 MobiDBLite consensus disorder prediction 182 243 - -
Gso6g0678 711 MobiDBLite consensus disorder prediction 65 102 - -
Gso6g0678 711 MobiDBLite consensus disorder prediction 196 243 - -
Gso6g0678 711 MobiDBLite consensus disorder prediction 54 109 - -
Gso6g0678 711 Coils Coil 581 601 - -
Gso6g0678 711 MobiDBLite consensus disorder prediction 152 166 - -
Gso6g0678 711 PANTHER DNA LIGASE (DUF630 AND DUF632) 1 708 - -
Gso6g0678 711 Coils Coil 650 670 - -
Gso6g0678 711 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Gso6g0678 711 PANTHER UNCHARACTERIZED 1 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0678 Gso-Chr6 6245730 6249483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g0678 1 601 Acyl Lipid Metabolism Gene Families AT2G27090 24.251 1.33e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0678 - - gmx:100807597 1287.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0679 4 6598265 6602211 Gso6g0678 6 6245730 6249483 GST