Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0660 ATGGTTTTCTGGGTTTTTGGCTACGGTTCACTGGTGTGGAACCCTGGATTCGATTACAATGAGAAGATTATAGGTTTCATTAAGGACTACAGACGCGTGTTTGATTTAGCGTGCATTGATCACCGGGGAACACCTGAAAACCCAGCAAGAACTTGCACGTTGGAGGAGAAGGAAGGGGCTATTTGCTGGGGAGCTGCTTATTGTGTTCGAGGAGGCCCTGAAAAGGAAAAACTGGCTATGCAGTATTTGGAGCGACGGGAATGTGAATATGACAGAAAGACTCTTGTAAACTTCTTCAAGGAAGGAGATTCACTGCACCCTACTTTAACTGATGTAATAGTATTCACATCTACTCCAGACAAAGTGAACAACAAATACTACCTGGGACCTGCTCCACTTGAAGACATGGCTAGGCAAATAGCAACTGCATATGGCCCTTGCGGAAACAACAGGGATTACATTTTCCTTCTAGAAAAGGCCATGTATGATATTGGCCATGAGGATGACTTAGTGATAGAGCTTGCCAATGAAGTGAGGAAAGTACTTGGAATGGGAAATGTAGTACCAAAGGAGAAGAAACTGGTTGGAGCAGCACAACTTCCACACCCTCCTCATGTAACAATCCCTACCCTTCAACTGCACCCACTGCCAGAACCTATTGCAATGGATATATAG 675 0.4459 MVFWVFGYGSLVWNPGFDYNEKIIGFIKDYRRVFDLACIDHRGTPENPARTCTLEEKEGAICWGAAYCVRGGPEKEKLAMQYLERRECEYDRKTLVNFFKEGDSLHPTLTDVIVFTSTPDKVNNKYYLGPAPLEDMARQIATAYGPCGNNRDYIFLLEKAMYDIGHEDDLVIELANEVRKVLGMGNVVPKEKKLVGAAQLPHPPHVTIPTLQLHPLPEPIAMDI* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0660 224 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 223 IPR006840 GO:0003839|GO:0006751
Gso6g0660 224 CDD GGCT_like 5 95 IPR013024 -
Gso6g0660 224 Gene3D - 2 173 - -
Gso6g0660 224 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 2 102 IPR036568 -
Gso6g0660 224 Pfam ChaC-like protein 4 180 IPR006840 GO:0003839|GO:0006751
Gso6g0660 224 ProSitePatterns Glycosyl hydrolases family 5 signature. 170 179 IPR018087 GO:0004553|GO:0005975
Gso6g0660 224 PANTHER GAMMA-GLUTAMYLCYCLOTRANSFERASE 2-2 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0660 Gso-Chr6 6117377 6120024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0660 K22596 - gmx:100778704 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0659 4 6455105 6457561 Gso6g0660 6 6117377 6120024 GST