Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0647 ATGATTAACACTTTTGTGTTGGCCATCACCACTCATTCATCCCATCTACTACTCCTACTCCAAATAATTATATTTATAAAGACCTTCCTTCCCGAGTTTTCTCTTGGATTATTTCTGAACCCCAACACAAAATTCACTATCTTTAGAGCCATGGCGGTTGTGGGAGGCGAAAAGGAGAAAGAGGAGCTTATTCCCGGGTTACCCTACGAAATTGCAGAGCTATGCCTTCTTCACGTTCCGTATCCGTACCAGGCACTGTCACGCTCTGTTTCGTCCACGTGGAACAGAGCAATAACGCACCCTTCCTTTATTTACTCCAAGAAGACCCTCTCCCACCCTCATCTCTTCGTACTAGCGTTTCATTCACAAACCGGGAAAATTCAGTGGCAGGCTTTGGACCCTTCCTCGGGGCGCTGGTTCGTTTTACCGCAAATGCCCTTGCCGGAAAACACTTCCTCCACGGCGTTCGCGAGCGCGGCGCTGCCGCGCCAGGGGAAGCTCTTTGTCATAGCCGGCGGCGGCGAAGGTTCCGACACCCTCGTCTACCGCGCCGCCACGAACCAGTGGGCACTGGCGGCGCCCACGCCGGGTGGGAGGAGGAGGGGCTTCTTCGCGGCGGAGGGAGTGGAGGGAAAGATCGTGGCCGTTGGGAGCGGCGGCACGGACATCTACGATCCGGAAAGCGACACGTGGCGGGAGGGGAAGACGCTGGGAGGGGAGCTGGAGAGGTACGAGGTTGTGGCGGCGGGGGGGAAGGTTTACGTGAGCGAGGGGTGGTGGTGGCCGTTCATGTTGAGTCCACGGGGATGGGTGTACGAAACGGAGAGGGACACGTGGCGGGAGATGGGGAGCGGAATGAGGGAGGGATGGAGCGGGGTGAGTGTGGCGGTCGGGGGAAGGGTTTTCGTGATCGCGGAGTACGGGGACGCACCGGTGAAGGTCTACGACGAGGAGTTCGACACGTGGCGCTACGTGAAAGGGGGGAGGTTTCCCAGGGACGTTATAAAGAGGCCGTTTTGCGCCACGGGGTTGGAGGACCGAATCTACGTGGCGTCTTTGGATTTGAACGTGGCCATTGGGAAAATTAAGGTGGGTGTGAATAGTAATAATGAGCAAGTGAGTGTGACGTGGGAGGTTGTGGAGGCACCGCGTGCTTTCCGTGAATTCTCTCCTTCTAGTTGCCAAATGCTCTATGCTTGA 1200 0.5658 MINTFVLAITTHSSHLLLLLQIIIFIKTFLPEFSLGLFLNPNTKFTIFRAMAVVGGEKEKEELIPGLPYEIAELCLLHVPYPYQALSRSVSSTWNRAITHPSFIYSKKTLSHPHLFVLAFHSQTGKIQWQALDPSSGRWFVLPQMPLPENTSSTAFASAALPRQGKLFVIAGGGEGSDTLVYRAATNQWALAAPTPGGRRRGFFAAEGVEGKIVAVGSGGTDIYDPESDTWREGKTLGGELERYEVVAAGGKVYVSEGWWWPFMLSPRGWVYETERDTWREMGSGMREGWSGVSVAVGGRVFVIAEYGDAPVKVYDEEFDTWRYVKGGRFPRDVIKRPFCATGLEDRIYVASLDLNVAIGKIKVGVNSNNEQVSVTWEVVEAPRAFREFSPSSCQMLYA* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0647 399 PANTHER F-BOX PROTEIN AFR 56 399 - -
Gso6g0647 399 Gene3D - 104 385 IPR015915 GO:0005515
Gso6g0647 399 SUPERFAMILY Kelch motif 114 351 IPR015915 GO:0005515
Gso6g0647 399 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 56 399 - -
Gso6g0647 399 SUPERFAMILY F-box domain 63 141 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0647 Gso-Chr6 5998323 6000030 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0647 - - gmx:100802282 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0645 4 6296626 6298324 Gso6g0647 6 5998323 6000030 GST