Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g0634 ATGCCTCTGGGAGAAAGGTCAGGGGATAAGAGCGAGTCTCGCTACTGCGGCGTAGAGACCGACTTCAACGATGACATGGCGCACGTCCTCCATTTCAACCTTTATTCTGGAAGCTTCGATTTCGTTGTTGCTCCTCTGATGGATCCTTCTTATAGGCCAAGTTTAGTTCAAAATGATGCTTTGGGGTCTGGTCTTCTGCCATTTGCTGGGTCAGACTTGGTCTTGAGTCCATCCCAATGGAGCAGTCATGTAGTGGGAAAAATTAGCTCATGGATAGATTTGGATTCAGAGGATGAAACCCTCAGGGTAGATTCTGAAACCACTCTTAGACAAGAAATTGCTTGGGCTTCTCATCTCTCTTTACAGGCCTGCCTTCTTCCTGCCCCCAAGGGAACTTCTTGTGCTAATTATGCTAGATGTGTGAATCAGATTTTACAGGGTTCAAATAATATGCAGTTGTGGCTTAGGCTTCCATTGGTGAAGCCTGATGATGACTCTATGGATGCAAAGTCTGTTGCTTTGGTTGACTACTGGGAAACTTGGAATTCATTTCGTCTGCTGTGTGAGCATCATAGTCAACTGTCAGTTGCACTTGATATTCTGAGTACTCTTCCTTCCCCAAATTCACTAGGACGTTGGTTTGGGGAGCCTCTTAGAGCAGCTATATTACATACTGATTGCTTTCTAACTAATTCTCATGGCTCTCCATGCCTCTCCAAGCGTCACCAGAGTTTAATTACTGGTGTTTTTAATCATTCTATTCAGATCATTATATCTGGAAATTCAGTTCATACAAAAGCAAGTATGGATGCAAATGATAATTCTGGTACAGATTCACAAAGACATCCCTTGCGGCCATATCTGGACTACGTTGGATATCTTTACCAAAGAATGGATCCTCTTCCTGAGCAAGAACGTTTTGAGCTTGGTTACAGGGATTTTTTACAGTCACCCTTGCAACCTTTGATGGATAATTTAGAGGCTCAGACTTACGAGACTTTTGAGAGAGATGCAATGAAATACATTCAGTACCAAAGAGCAGTTAGTAAAGCATTGCTGGACAGGGTTCCTGATGAAGAGGCATCTGTTAAAACCATTGTATTGATGGTTGTGGGGGCAGGGCGTGGGCCTCTTGTGCGGGCTTCATTACAGGCTGCTGAAGAAACTGGGCGGAAGCTCAAAGTTTATGCTGTTGAAAAGAATCCGAATGCTGTTGTTACCCTACATGCATTAGTCAAGTTAGAAGGATGGGAGTATACTGTGACCATAGTCTCAAGTGACATGCGTCATTGGAATGCCCCTGAAAAAGCTGACATATTGGTTAGTGAATTGCTAGGTTCTTTTGGTGACAACGAACTGTCTCCTGAGTGCCTTGATGGAGCCCAGAGATTTCTAAAGCAAGATGGAATTTCAATACCATCTTCGTACACAAGTTTCCTCCAACCAGTGACAGCTTCAAAGTTATATAATGATGTTAAGGCTCATAAAGACCTTGTACACTTTGAAACTGCTTATGTTGTGAAAATGCACAATGTAGCCAGACTTGCACCAACCCAACCTGTTTTTACATTTACTCATCCAAAGCACTCTGATACAGAAAGCAATCAGCGCCATAAAAAGTTGAATTTTGTGATACCTAATGACACTGGGTCAGCAATGGTACACGGATTTGCTGGTTATTTTGATGCAACTCTTTACAAGGATGTGCATCTTGGAATTGAACCTTCAACGGCAACACCAAACATGTTCAGTTGGTTTGCAATATTTTTCCCATTAAGGACACCCATTTGTGTGGATCCCGGTTCTACACTTGAAGTACATTTTTGGCGTTGTTGTGGTTCTACAAAGGTTTGGTATGAGTGGTGTGTTGCCTCTCCCTCGTCGTCCCCAATTCACAACAGTAATGGACGTTCATACTGGGTTGGGCTTTAG 1932 0.4301 MPLGERSGDKSESRYCGVETDFNDDMAHVLHFNLYSGSFDFVVAPLMDPSYRPSLVQNDALGSGLLPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDETLRVDSETTLRQEIAWASHLSLQACLLPAPKGTSCANYARCVNQILQGSNNMQLWLRLPLVKPDDDSMDAKSVALVDYWETWNSFRLLCEHHSQLSVALDILSTLPSPNSLGRWFGEPLRAAILHTDCFLTNSHGSPCLSKRHQSLITGVFNHSIQIIISGNSVHTKASMDANDNSGTDSQRHPLRPYLDYVGYLYQRMDPLPEQERFELGYRDFLQSPLQPLMDNLEAQTYETFERDAMKYIQYQRAVSKALLDRVPDEEASVKTIVLMVVGAGRGPLVRASLQAAEETGRKLKVYAVEKNPNAVVTLHALVKLEGWEYTVTIVSSDMRHWNAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYTSFLQPVTASKLYNDVKAHKDLVHFETAYVVKMHNVARLAPTQPVFTFTHPKHSDTESNQRHKKLNFVIPNDTGSAMVHGFAGYFDATLYKDVHLGIEPSTATPNMFSWFAIFFPLRTPICVDPGSTLEVHFWRCCGSTKVWYEWCVASPSSSPIHNSNGRSYWVGL* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g0634 643 Pfam PRMT5 oligomerisation domain 475 641 IPR035248 -
Gso6g0634 643 Gene3D Vaccinia Virus protein VP39 307 474 IPR029063 -
Gso6g0634 643 Pfam PRMT5 TIM barrel domain 39 297 IPR035247 -
Gso6g0634 643 Gene3D - 475 643 - -
Gso6g0634 643 Gene3D - 14 304 - -
Gso6g0634 643 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 643 - -
Gso6g0634 643 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 331 642 IPR029063 -
Gso6g0634 643 PIRSF PRMT5 3 643 IPR007857 GO:0006479|GO:0008168|GO:0035246
Gso6g0634 643 Pfam PRMT5 arginine-N-methyltransferase 303 472 IPR035075 -
Gso6g0634 643 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 315 621 IPR025799 GO:0016274|GO:0018216
Gso6g0634 643 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 1 643 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g0634 Gso-Chr6 5875037 5883565 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g0634 K02516 - gmx:100815240 1316.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0631 4 6140368 6148964 Gso6g0634 6 5875037 5883565 GST